Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01551 ATGGCTTCTTCTGTTGCATTAGTTTTCAGTGTTTTTCTAGCACTCAACATGGCCATGCCAACCCTTGCAGCCACCCACACAGTAGGAGATACCTCAGGTTGGGCAATTGGTGGTGATTACAGTACATGGGCTAGTGGATTGAAATTTAGAGTTGGAGATAGTCTTGTTTTCAATTACGGGCCTGGTCACACTGTGGATGAAGTAAAAGAAAGCGATTACAAGAGCTGCAGCACAGGAAATTCTCTGAGCACAGACAGTAGCGGCGCCACCACCATTACCCTGAAGACTGCTGGCACTCATTACTTCATATGTGCTGCTCCTAGCCATTGTCAAGGTGGCATGAAGCTTGCTGTTAAGGTTAAGGCTAAAAAGGTTTCTGATTCTGCTGCAGCACCTTCACCTGCTAAAGACTCACCACCCTCTGACTCTGATAACACCAAAGACACACCCACTACTTCCACCACCACCACCCCTACAACTCCAACCTCCACCACCCCTTCTACTTCAACCTCCTCCTCCACCACCGCCGCAATATCATCAGCAATTCCAGGGTCACCAATTGGTGGTGCTGTGTTTATTGGTTGTTGGATCTCGTACTTGGTGTTGCGTTTGCTGTGA 618 0.4822 MASSVALVFSVFLALNMAMPTLAATHTVGDTSGWAIGGDYSTWASGLKFRVGDSLVFNYGPGHTVDEVKESDYKSCSTGNSLSTDSSGATTITLKTAGTHYFICAAPSHCQGGMKLAVKVKAKKVSDSAAAPSPAKDSPPSDSDNTKDTPTTSTTTTPTTPTSTTPSTSTSSSTTAAISSAIPGSPIGGAVFIGCWISYLVLRLL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01551 205 MobiDBLite consensus disorder prediction 138 174 - -
Viun8g01551 205 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Viun8g01551 205 CDD Phytocyanin 24 114 - -
Viun8g01551 205 Gene3D - 22 127 IPR008972 -
Viun8g01551 205 MobiDBLite consensus disorder prediction 127 174 - -
Viun8g01551 205 PANTHER BLUE COPPER PROTEIN 22 143 IPR039391 GO:0009055
Viun8g01551 205 FunFam Blue copper 22 126 - -
Viun8g01551 205 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Viun8g01551 205 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Viun8g01551 205 Pfam Plastocyanin-like domain 37 114 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01551 Viun-Chr8 25955791 25957161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01551 31 123 Miscellaneous Gene Families AT1G22480 59.140 6.33e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01551 - - gmx:100305666 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01551 8 25955791 25957161 Viun8g01551 8 25955791 25957161 ECH
Viun8g01551 8 25955791 25957161 Viun9g02611 9 35129142 35130232 PCT