Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02600 ATGAAGAAGACGAAGAACCCCACACTCCGAGAGAGAAGAGGACCAATGCAGCAGAAGCGTCGAACGGTTCCACTGGGCATGCTCAGAAGGTTTCTCGCCGCCTCCATATTCTCCATAGTTGTCACTTCTTTCTTCTTTGTTCACGTTCACGTTTCTCCTTCGCCCACTCATCACAACTTCAGTGACAAGATCCCCTCGTTTTATGACCCGCAAAGCTGGACTCGAGAACTCGTTCCGCCCTATCTATTCAAGACTCCGCTCTCTGTTCCCAAGTCGAAGGATTCAAGAAAGGAGTCAGACTACGATAAATTGTGGAAGCCTCCACCAAATCACGGGTTTATAACCTGCACGAAGCCTACTCCTAATTACACAACTCCGACAAGGTCACGGGGTTACCTTTCAGTTCATACAAATGGAGGGCTAAACCAAATGCGTTCCGGGATATGTGATATGGTAGCTATAGCTCGTATCATCAATGCTACTCTTGTGATTCCAGAACTTGATAAAAAATCATTTTGGCGTGATACCAGCAATTTCTCTGATATCTTCGATGATGAGTGGTTTATTAGTTCTCTGGCTAATGATATAAAGATCATTAAGAAGCTTCCCAAGAAACTGGTTAACGCAACCAAAATCGTCATGCAATTCAAAAGCTGGTCTGGTATGAATTACTATGAGAATGAGATTGCTGCCTTGTGGAATAGTTTCAATATAATTCGAGCTTCCAAATCTGATTCTCGGTTAGCAAATAACAATCTACCTCCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGTTTCTCTCCTCGTATTGAAAAAATGGGAAAAACATTGGTGGAGAGGATGAGGTCATTCGGCCCCTATATTGCACTGCATTTACGTTATGAGAAGGACATGCTTGCATTTAGTGGGTGCACACATGAATTATCTCCAGTTGAATCTGAAGAGCTACGGTTTATCAGAGAGAATACTACTTATTGGAAAAGAAAATACATTAATCCCATAGAAGAGAGGTCGAAAGGATTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTTGGATACCCATCAAAGACTCCAATTTATATTGCCGCTGGGGAGATATATGGTGGTGAGTTCCATATGGCTGACCTGCGATCTCGCTATCCACTGTTAATGAACAAGGAAAAGTTGGTATCCATGGAGGAGCTTCAACCCTTTTCTAGTCATGGGTCTCAAATGGCTGCTATTGACTATATTGTATCAGTTGAAAGTGATGTGTTTGTACATTCTTACCCTGGAAACATGGCGAAGGCCGTTGAAGGGCATCGTCGAGTTCTCGGGAGAGGAAGAACAATATCTCCCGACAGGAAAGGGCTTGTTCGTTTGTTTGATAAACTGGAAAATGGATCAATGACCGAGGGGAAAACACTGTCTAATAAAATTATCGATCTCCACAGAAGACGGCTTGGCTTCTTCAGAAAGAGAAAAGGACCCGTTGCTGGAACAAAGGGCTTGGACAGGTTTCGGTCAGAAGAAACATTTTATGCAAACCCTTTACCTGGTTGTTTATGTCGGACAGAATCACTCTCGATAAACGCTTCTCAGTATAGGTAG 1620 0.4309 MKKTKNPTLRERRGPMQQKRRTVPLGMLRRFLAASIFSIVVTSFFFVHVHVSPSPTHHNFSDKIPSFYDPQSWTRELVPPYLFKTPLSVPKSKDSRKESDYDKLWKPPPNHGFITCTKPTPNYTTPTRSRGYLSVHTNGGLNQMRSGICDMVAIARIINATLVIPELDKKSFWRDTSNFSDIFDDEWFISSLANDIKIIKKLPKKLVNATKIVMQFKSWSGMNYYENEIAALWNSFNIIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEKMGKTLVERMRSFGPYIALHLRYEKDMLAFSGCTHELSPVESEELRFIRENTTYWKRKYINPIEERSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGEFHMADLRSRYPLLMNKEKLVSMEELQPFSSHGSQMAAIDYIVSVESDVFVHSYPGNMAKAVEGHRRVLGRGRTISPDRKGLVRLFDKLENGSMTEGKTLSNKIIDLHRRRLGFFRKRKGPVAGTKGLDRFRSEETFYANPLPGCLCRTESLSINASQYR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02600 539 MobiDBLite consensus disorder prediction 1 21 - -
Viun9g02600 539 FunFam O-fucosyltransferase 28 263 457 - -
Viun9g02600 539 Pfam GDP-fucose protein O-fucosyltransferase 132 447 IPR019378 -
Viun9g02600 539 PIRSF UCP009360 1 529 IPR024709 -
Viun9g02600 539 CDD O-FucT_plant 132 453 IPR024709 -
Viun9g02600 539 PANTHER OS02G0726500 PROTEIN-RELATED 30 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02600 Viun-Chr9 35067456 35071311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02600 76 529 Miscellaneous Gene Families AT1G22460 64.537 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02600 - - gmx:100807411 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02600 9 35067456 35071311 Viun9g02600 9 35067456 35071311 ECH
Viun8g01544 8 25692397 25701703 Viun9g02600 9 35067456 35071311 PCT