Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01544 ATGCAGAAGCGCAAGTGGATTCCGTTGGCGCTGCTGAGAAAGTTGCTCATTTCAGCCATATGCTGCATAGCGTTTGTGGCTCTCTTCTCTGTGCGCATACACATTGTTCCTTCCTCTAAGGATCACAGGTTCAACGACAAGATCTCCACGGCTCAGGATCTGCACAGCTGGACGCGAGAGCTCGCACCGCCACATTTGTCCAAAGCTCCAGTTTCTACTCCCAAGTTGAATGGTACAAGAGGGTACTTAGATTACCAGAAGTTGTGGAAGCCTCCATCAAATCGTGGGTTTTTGCCCTGTACAAAGCCCACTCCTAATTACACTACTCCTGCAGAGTCGCGAGGATATCTTTTAGTACACACAAATGGTGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTGGCTCGTATAATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGATCATTTTGGCAAGATACTAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATGAATTCTCTAGCTAATGATGTAAAAATCATTAAAAAACTCCCCAACGATCTAGTTAACGAAACCAAAGTGGTCAAACAATTCATAAGCTGGTCTGGCATGGATTACTACGAGAATGAGATTGCTAGCTTGTGGGAAGAATACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTACCTCCCGACATTCAGAAGCTTCGATGCCGGGCTTGTTATGAAGCACTTCGCTTCTCTCCTCGCATTGAACAACTGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCCTTACATTGCGCTGCACTTGCGTTACGAGAAGGATATGCTTGCATTTAGTGGCTGCACCCATGATTTATCTCTTGTTGAAGCTGAAGAACTACGAATGATCAGGGAGAACATTTCCTATTGGAAAATAAAGGAGATTGATCCAATAGAACAGAGGTCCAAAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACTGCTCTTGGATACCCATCAACAACTCCTATATATATTGCTGCTGGAGAGATATATGGGGGCGAGTCCCACATGGCTGAATTGCGTTCCCGGTATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCTTTTTCCAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTCATACCTTCTTATTCTGGAAACATGGCAAAGGCTGTTGAGGGTCATCGTCGTTTTCTTGGACGTGGAAGAACAATATCTCCCGACAAGAAAGTCCTCGTTCGCCTGTTTGATAAACTAGATCAGGGACTAATCACGGAGGGGAAGAAACTATCAAATAGGATTATTGATCTCCACAGAAGACGACTTGGTTCTCCCAGAAAGAGAAAAGGGCCAATTTCTGGGACAAAGGGCATGGAAAGGTTCCGGTCAGAAGAAACCTTTTATGCTAATCCCTTACCTGATTGTTTATGCCGGACAGAACAACCACCACCACCACCACCTCTAAACACCTCTCACATTGTTTGA 1584 0.4362 MQKRKWIPLALLRKLLISAICCIAFVALFSVRIHIVPSSKDHRFNDKISTAQDLHSWTRELAPPHLSKAPVSTPKLNGTRGYLDYQKLWKPPSNRGFLPCTKPTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDVFDEEHFMNSLANDVKIIKKLPNDLVNETKVVKQFISWSGMDYYENEIASLWEEYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEQLGKLLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSLVEAEELRMIRENISYWKIKEIDPIEQRSKGFCPLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLGRGRTISPDKKVLVRLFDKLDQGLITEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKGMERFRSEETFYANPLPDCLCRTEQPPPPPPLNTSHIV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01544 527 PIRSF UCP009360 1 514 IPR024709 -
Viun8g01544 527 PANTHER OS02G0726500 PROTEIN-RELATED 15 511 - -
Viun8g01544 527 CDD O-FucT_plant 116 437 IPR024709 -
Viun8g01544 527 FunFam O-fucosyltransferase 28 247 441 - -
Viun8g01544 527 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01544 Viun-Chr8 25692397 25701703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01544 37 513 Miscellaneous Gene Families AT1G22460 68.553 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01544 - - gmx:100795727 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01544 8 25692397 25701703 Viun8g01544 8 25692397 25701703 ECH
Viun8g01544 8 25692397 25701703 Viun9g02600 9 35067456 35071311 PCT