Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02518 ATGGAAAATATACAGTTAGAGGAGACGACTGGAGTGAATTCTCAAGCTGTTGATAACTTGCGGGTGGGTGATTCGGTAACTGATCAGAAGAACCAATCAAAGGAGACTGATTTGGTAACTGATCAGAAGAAACAGTCAAAGGAGGCGGAGGGTCAAATTATTGGTCATGATGGTCCCGAATTTGATGATATACCAGATGCGGAAGATGTAAGGTCCAAGAGGAACGATAGGGATTTACAATCTCGAACTCAACTGGAAAACTTGGAAACCAAATCTGAAACTGAAATTATTACTGATAGGCAAGAGGAGTCTGGTGATAAGACGAGTGCTGTTGGAGATTTGGAGTTCAGAAACCAAGAAACAAATCTAGATGGTGATTCTGGACGGAGTGGCTTGACTAAAGAAGTGGATGATAGGGAATCCATGCAGATGTTTGATAAGTCAGATGAAATTCCAAGCGAGGACCCCAATTTGGAACCTGTTTTTGATGGAACAGAGGTTCCAGGGATGGAAGCTAACCGCAGTATGTCTGGTCGTAGGTTGGATGCAGATCAGGACTCCCCAGGTGTGGTTGAGAAGGCTGTGGCTCTTAAGAATTTTGTTAAGGAGAAGAGTGCAGTGGCAGTCTCCACCATGATGCGTCGTCTCTCTGGAAAAAGAGATGAAGTTACTGTGGATAATGTTGATGATGAAGGTAAGGAAGTATCAGATATTGGAAAAGTTGGTGAAAACAAGATGGTGTCTGAGAAATTTGACTGGAATCCCTTAAACTACATCAAGAAGTCATCCGATGCTGGTGCCGAAAACAAAACTGAGCAGATAGACTCAATAGTCATGAAAGGAAGGATTATACTGTACACGAAACTAGGGTGCCAAGAATCTAACGAGATTAGGCTTTTTTTGCGTTTGAAAAGGCTTAGATATGTAGAAATCAACATAGATGTGTTCCCTAGTAGAAAGAAGGAGCTGGAAAGGATTTCTGGATCTACTTCTGTACCAAAGGTTTTTTTCAATGAAATACTTATTGGAGGCTCGAGTGAGTTGAAGACTCTAGATGAGTCTGGCAAGCTTGATGAGAAGGTTGACTTTCTTATTACTGAAGCACCACTATTTGAGGCCCCATCGCCACCTCTCTCTGGCGAGGATGATGTACCCAGTAGTGGACTACCTGATGAAATGGCAATTATTGTCCGCAAAATGAAAGAATCCATAGCTGTGAAGGACCGCTTGCATAAAGTGCGGAGGTTCTCGAACTGTTTTCTAGGCTCAGAAGCTATCGACTTCTTATCAGAAGATCAATATTTGGAAAGGCCTGAGGCTGTTGAGTTTGCACGAAAGCTTGCCGAGAAACACTTCTTTCGACATGTTACTGATGAAAATCTATTTGAGGATGGAAACCACCTGTATCGGTTTTTGGATGATGACCCCATTGTGGTGTCACAATGTCACAACATTTCTAGAGGCATAAGCACCTTGAAGCCCAAGCCTTTAGCGGAAATTGCGTCAAGACTAAGGTTTCTGTCCCGTGCAATATTTGAAGCCTATGCTTATGAAGATGGACGGCGTGTTGATTATACAAGTATACATGGAAGTGAGGAGTTCGCAAGGTATCTGAGAATTGTGGAAGAGCTCCAGAGAGTGGAAATATCGGATTCGTCCAGAGAAGAGAAGCTTGCGTTCTTTATTAATCTTTATAATATGATGGCCATCCATGCAATCTTAGTGTTGGGCCATCCAGATGGAGCAATGGAAAGGAGGAAATTATTTGGAGAGTTCAAATATGTTATTGGTGGGTCCACCTACTCACTATCAGCTATTCAAAATGGCATATTGCGGGGAAACCAGCGACCACCATATAACCTTAAGAAGCCATTTGGGGCAAAAGATAAACGCTCGACAGTGGCACTTCCTTACCCTGAGCCTCTAATTCATTTTGCTTTGGTATATGGTACCCGATCTGGGCCTGCACTTCGGTGCTACACTCCTGGAAAGATTGATGAAGAGTTATTGGATGCAGCCCGTAATTTTTTGAGAAATGGAGGCATTGTAATTGATTCGAGTGCAAAGGCTGTAAATGCTAGTAAGATCCTTAAATGGTACAGTATAGATTTTGGCAAGAACGAGGTAGAGGTGATAAAGCATGTTTCAAACTACTTAGATCCAGCTGACTCTGAAGTATTGTTGGACCTACTTGCTGCTTCCGAGTTGAAGGTGACATATCAGCCTTATGACTGGGGTTTGAACTGCTAG 2250 0.4267 MENIQLEETTGVNSQAVDNLRVGDSVTDQKNQSKETDLVTDQKKQSKEAEGQIIGHDGPEFDDIPDAEDVRSKRNDRDLQSRTQLENLETKSETEIITDRQEESGDKTSAVGDLEFRNQETNLDGDSGRSGLTKEVDDRESMQMFDKSDEIPSEDPNLEPVFDGTEVPGMEANRSMSGRRLDADQDSPGVVEKAVALKNFVKEKSAVAVSTMMRRLSGKRDEVTVDNVDDEGKEVSDIGKVGENKMVSEKFDWNPLNYIKKSSDAGAENKTEQIDSIVMKGRIILYTKLGCQESNEIRLFLRLKRLRYVEINIDVFPSRKKELERISGSTSVPKVFFNEILIGGSSELKTLDESGKLDEKVDFLITEAPLFEAPSPPLSGEDDVPSSGLPDEMAIIVRKMKESIAVKDRLHKVRRFSNCFLGSEAIDFLSEDQYLERPEAVEFARKLAEKHFFRHVTDENLFEDGNHLYRFLDDDPIVVSQCHNISRGISTLKPKPLAEIASRLRFLSRAIFEAYAYEDGRRVDYTSIHGSEEFARYLRIVEELQRVEISDSSREEKLAFFINLYNMMAIHAILVLGHPDGAMERRKLFGEFKYVIGGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSTVALPYPEPLIHFALVYGTRSGPALRCYTPGKIDEELLDAARNFLRNGGIVIDSSAKAVNASKILKWYSIDFGKNEVEVIKHVSNYLDPADSEVLLDLLAASELKVTYQPYDWGLNC 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02518 749 MobiDBLite consensus disorder prediction 28 110 - -
Viun9g02518 749 SMART DEP_3 400 473 IPR000591 GO:0035556
Viun9g02518 749 ProSiteProfiles DEP domain profile. 400 473 IPR000591 GO:0035556
Viun9g02518 749 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 404 471 IPR000591 GO:0035556
Viun9g02518 749 MobiDBLite consensus disorder prediction 1 27 - -
Viun9g02518 749 Gene3D Glutaredoxin 268 363 - -
Viun9g02518 749 MobiDBLite consensus disorder prediction 130 154 - -
Viun9g02518 749 Pfam Glutaredoxin 283 339 IPR002109 -
Viun9g02518 749 Gene3D - 392 515 IPR036388 -
Viun9g02518 749 MobiDBLite consensus disorder prediction 1 166 - -
Viun9g02518 749 Pfam Protein of unknown function, DUF547 551 677 IPR006869 -
Viun9g02518 749 SUPERFAMILY Thioredoxin-like 271 361 IPR036249 -
Viun9g02518 749 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 18 749 - -
Viun9g02518 749 ProSiteProfiles Glutaredoxin domain profile. 271 368 - -
Viun9g02518 749 SUPERFAMILY "Winged helix" DNA-binding domain 394 477 IPR036390 -
Viun9g02518 749 CDD DEP 392 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02518 Viun-Chr9 34272926 34277028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02518 - - gmx:100820242 1198.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02518 9 34272926 34277028 Viun9g02518 9 34272926 34277028 ECH
Viun8g01416 8 22542804 22556653 Viun9g02518 9 34272926 34277028 PCT