Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02304 ATGGCTAACAATGCTGCTGCCTGTGCTGAGAGAGCAACTAGTGACATGCTCATTGGCCCGGATTGGGCTATCAACATAGAGTTGTGTGATATCATTAATATGGACCCGGGGCAAGCAAAGGATGCATTGAAGATACTCAAAAAGCGTTTGGGCAGTAAAAATCCAAAAATACAGCTTCTGGCACTTTTTGTATTGGAGACCCTCAGTAAAAATTGTGGTGAAAGTGTATTTCAGCAGATAATCGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCAGATTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAAGAAGCTTTTGGGGGGCCAACTGGGGTTTATCCTCAATACCATGCAGCGTATAATGAATTGAAGTCTGCGGGAGTTGAGTTTCCACCACGAGATGAGAATAGTGTACCATTCTTCACTCCTCCTCAAACTCAGCCAATTGTTCATGCTGCTGAAGAATTTGATGACGCTACTATTCAGGCTTCTCTCCAGTCAGATGCATCTGGCCTTAGTTTGACAGAGATTCAAAATGCTGAAGGACTAGCTGATGTGTTGATGGAAATGCTTAGTGCCTTGAATCCTAAAGACCATGAGGGTGTGAAGGAGGAAGTGATTGTTGACCTTGTTGACCAGTGCCGTTCATACCAAAAGCGGGTCATGCTTCTTGTGAACAGTACTACGGATGAGCAGCTTTTAGGCCAGGGATTGGCACTGAATGACAGCCTTCAGCGTGTGCTCCGTAGACATGATGATATTGTGAAAGGAACTTCTGATTCAGGTGCTAGAGAAGCAGAAACTTCAGTTCTGCCACTTGTAAATGTAAACCACGAAGATGATGAAGCAGAAGAGGATTTCGCTCAACTAGCCCATAGGTCATCACGTGATGCTCATGTACAGAATAGGAAACCAATCTACGACAAGGCAGAATCAGGGATTATAAACCCAGTTCTTCCCCCACCACCAGCATCAAAGAAGCCTGTCTACTCTGGCACTGGTGTGGTCGACTATCTCAGTGGTGATACATACAAGACAGAAGGATCTCAAAACTCAGAACCCGCTTCATTAGCAGCTCCCGCTCACTCTAGCCCTAATCCAACCTCATCAGTGTCTTCTTCTCGTCCCCATACCGTGAGTACCTCATCACCAATTTTTAGCAGCCAGCCTGTGTATGATGAACAGCCATCTTCTGTGGACAAATCTTCTGAGCGGCTGCCTCCAGCTCACTGGGACACTCAATCTACTGGCATCATTCCACCTCCACCTTCAAAGTATAATCAGAGACAACAATTTTTTGAGCAACAAGGTGCATCCCATTCAAGTAGTGGATCTAGTTCCTCTTATGACAGCTTGGTGGGACAAACTCAAAATCTCTCGCTGAATTCATCCACCCCAACCAAAGAACAGAAGCCAGAAGATGCCCTTTTCAAAGATCTTGTTGATTTTGCAAAATCCAAAACCTCATCATCTTCCAAACCCAATAGGTCATATTGA 1527 0.4434 MANNAAACAERATSDMLIGPDWAINIELCDIINMDPGQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGPTGVYPQYHAAYNELKSAGVEFPPRDENSVPFFTPPQTQPIVHAAEEFDDATIQASLQSDASGLSLTEIQNAEGLADVLMEMLSALNPKDHEGVKEEVIVDLVDQCRSYQKRVMLLVNSTTDEQLLGQGLALNDSLQRVLRRHDDIVKGTSDSGAREAETSVLPLVNVNHEDDEAEEDFAQLAHRSSRDAHVQNRKPIYDKAESGIINPVLPPPPASKKPVYSGTGVVDYLSGDTYKTEGSQNSEPASLAAPAHSSPNPTSSVSSSRPHTVSTSSPIFSSQPVYDEQPSSVDKSSERLPPAHWDTQSTGIIPPPPSKYNQRQQFFEQQGASHSSSGSSSSYDSLVGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNRSY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02304 508 SUPERFAMILY GAT-like domain 140 267 - -
Viun9g02304 508 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Viun9g02304 508 MobiDBLite consensus disorder prediction 427 480 - -
Viun9g02304 508 Pfam GAT domain 194 267 IPR004152 GO:0035091|GO:0043130
Viun9g02304 508 SUPERFAMILY ENTH/VHS domain 4 142 IPR008942 -
Viun9g02304 508 Gene3D - 2 158 IPR008942 -
Viun9g02304 508 MobiDBLite consensus disorder prediction 353 407 - -
Viun9g02304 508 Pfam VHS domain 9 135 IPR002014 GO:0035091|GO:0043130
Viun9g02304 508 CDD VHS 10 135 - -
Viun9g02304 508 Gene3D - 175 274 IPR038425 -
Viun9g02304 508 PIRSF TOM1 1 507 IPR014645 -
Viun9g02304 508 FunFam TOM1-like protein 2 4 151 - -
Viun9g02304 508 CDD GAT_GGA-like_plant 186 264 - -
Viun9g02304 508 PANTHER TOM1-LIKE PROTEIN 1 504 IPR044836 GO:0035091|GO:0043130|GO:0043328
Viun9g02304 508 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Viun9g02304 508 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Viun9g02304 508 MobiDBLite consensus disorder prediction 351 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02304 Viun-Chr9 32505213 32510420 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02304 - - gmx:100792343 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00946 8 10016482 10026936 Viun9g02304 9 32505213 32510420 PCT