Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02294 ATGGCTAAAGTTTGTTGGCCATATTTTGATCCCGAGTATGAGAACTTCAGCAATAGAATGAACCCACCAAGGGTCTCTGTGGACAATGAAAGTTGCCATGACTGTACACTGATCAAGGTTGATAGTGTTAACAAACCTGGAATTCTTCTGGAAGTGGTGCAAATCTTGACCGACCTTGACTTCATAATTACAAAAGCTTACATATCTTCTGACGGCGGTTGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAGAAAGATAACAGATAGCAAAACCATCGACTTCATTGAAAAGGCTCTAGGACCAAAGAGCCAGAGCACAGAAGGGGTGAAATTTTGGCCAAGCAAAAGGGTTGGAGTGCATTCTGTGGGTGATCATACAGCCATTGAACTAATTGGCAGAGACCGTCCTGGTCTCTTGTCTGAGATTTCAGCTGTTCTTGCCAACCTCCATTTTAATGTTTTTGCAGCAGAAGTGTGGACTCATAACAGGCGAATTGCTTGCGTTCTTTATGTCAATGATGCTACAAACCGAGCTGTGGACGAGCCAAACAGATTATCTCTAATGGAGGAGCAGCTGAACAACATCTTACGAGGATGTGATGGTGAGAAAGTTGCTAGGACTAGTTTCTCCATGGGTTTCACCCACATGGATCGGCGGCTTCACCAAATGTTGTTTGCTGATCGGGATTATGAAAGTTATAGAGTAGCACCAGACGTTAATTGTCCTCTCTCTTTCAGGCCTAAAATCACAATAGAACGTTGTGAGGAGAAAGGGTACTCAGTGGTCACAGTCAAGTGCAAGGATCGGGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAGTTTCATCAGATGGCCCTTACGCATCCCAGGAGTATTTTATTCGACATATGGATGGATGCACACTTGACACTGAAGGAGAGAAAGAAAGGGTCATCCAATGCATTGAAGCTGGTATTCGAAGAAGAGTAAGCGAGCTATCTACTTGTATTGCTGCACTGGTACGGCAAATACATGAGCTAAGCATCATATGTCCACTAGTGACAGTGATGGGATCTTTTGCCTTCAATAGAGCTTAA 1119 0.4325 MAKVCWPYFDPEYENFSNRMNPPRVSVDNESCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGRKITDSKTIDFIEKALGPKSQSTEGVKFWPSKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDATNRAVDEPNRLSLMEEQLNNILRGCDGEKVARTSFSMGFTHMDRRLHQMLFADRDYESYRVAPDVNCPLSFRPKITIERCEEKGYSVVTVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYASQEYFIRHMDGCTLDTEGEKERVIQCIEAGIRRRVSELSTCIAALVRQIHELSIICPLVTVMGSFAFNRA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02294 372 CDD ACT_ACR_3 262 336 - -
Viun9g02294 372 Pfam ACT domain 130 199 IPR002912 -
Viun9g02294 372 Pfam ACT domain 37 86 IPR002912 -
Viun9g02294 372 SUPERFAMILY ACT-like 32 106 IPR045865 -
Viun9g02294 372 Gene3D - 128 202 - -
Viun9g02294 372 SUPERFAMILY ACT-like 125 201 IPR045865 -
Viun9g02294 372 CDD ACT_ACR_1 35 105 - -
Viun9g02294 372 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Viun9g02294 372 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 340 IPR040217 -
Viun9g02294 372 ProSiteProfiles ACT domain profile. 130 209 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02294 Viun-Chr9 32352198 32358583 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02294 - - gmx:100789173 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02294 9 32352198 32358583 Viun9g02294 9 32352198 32358583 ECH
Viun8g00992 8 11147982 11157887 Viun9g02294 9 32352198 32358583 PCT