Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02184 ATGGCTTGTGTGGCACTTCGTCCTGTGCGTGAAGAATCTTTCAACGCTGGTGGTAAATTCACCGGCTGTTTCAGTCCTCTTTTGAGGGACTCAATTTTGATTTACCTAACTGTTGGTGGATCTGTGATTCCTTTGCGTATTATGAAGACAGATTCAATTGCTTCGGTGAAGCTGAGAATTCAAACCTTCAAAGGATTTTTCGTAAAAAAACAGAAACTGGTTTTTGAAGGGAAGGAGTTGGCTCGTAACAAATCCTGTATCCGTGATTATGGGGTTGGTGATGGGAATATTCTGCACCTGGTGCTGAGGCTTTCTGATCTCAAAGCTATTACAGTTAAGACTGTGTGTGGAAAGGAGTTTGCGCTTTATGTTGAGAAGAGTAGGAGTGTCGGTTATGTAAAGCAGCAGATTGCAAAAAAAGGGCAAGGGTTAGTAGATCTCAAGGATCAAGAACTGATATGTGAGGGTGAGGCACTTGAAGACCAGAGGCTTATTGAGGATATATGTAAGGACAATGATGCTGTAATTCATTTTTTGGTCAGAATATCAGATGCCAAGGTAAGGACTAAACCAGTCGAGAAGGATTTTGAATTATCAATTGAGGCATCGTATGTACACAATCTGGTGTCAAATTTACATGCAGACCAGTTAGGGCCAGTCTCTGTAACAAATGAGATCCTGGAGAGGAATCAATTGTCAAGGGATTATCTTGTGGAGCCAATTATTATGAATTCCAACATGAAAATTCCACCAGTGATTCACAAGATAATTAAGATGACTTTAGAGGGGTTAGAAAATGGCTGTAAACCAATTCAATCTCCAGAGGGATCAGGAGGAGCGTATCTCATGCAAGATTCATCTGGCTTGAAGTATATTTCTGTTTTCAAACCCATTGATGAAGAGCCAATGGCAATTAATAACCCTCGAGGCTTACCTATTTCCGAGGATGGTGAAGGGCTAAAGAAAGGTACACGAGTAGGGCAAGGTGCGTTGAGAGAAGTTGCTGCTTACATTTTGGACCATCCTAGGAAAGGGCCACGCTCATATCATAACAATGATGAACCAGGATTTGCTGGAGTTCCACCCACAGTCTTGGTTAAATGCCTGCATAAAGGATTTCATAATGTTGAAGATTATCAAAATGTTTCAGGTAATGCTAAAATAGGATCGCTTCAGATGTTTATGAGGAATATTGGAAGTTGTGAAGACATAGGTCCTAGTGCTTTTCCAGTGGAAGAGGTACACAAGATCTCTGTACTGGATATCAGGTTGGTCAATGCTGATAGGCATGCTGGCAACATTTTGATTTCCAAGGATGGTGAAGACGGTCATACAATCCTCATTCCAATTGATCATGGCTATTGCTTGCCTGAGAGCTTTGAAGACTGCACTTTTGACTGGTTATACTGGCCACAAGCTAAGGAACCTTACTCTGCAGACACCATTGATTACATAAAATCTCTGGATGCTGAAGAAGATATAAAACTTTTGAAATTCCATGGATGGGATCTTCCTCCCAAGTGTGCCCAGATACTTCGTATATCAACCATGCTTCTTCAGAAAGGTGCAGAGAGAGGACTCACTCCTTTTGCCATAGGAAGCATCATGTGTAGAGAAACACTGAAGAAAAAATCTGTGATTGAAGAGATTGTGCAGGAAGCTGAGGAAGCTGCATTTCCTGGTGCAAGTGAAGCTGCATTTCTTGATCTCGTTTCAGTGATCATGGATTGTCATTTGGATGAGCTATTCCAGTGA 1755 0.4148 MACVALRPVREESFNAGGKFTGCFSPLLRDSILIYLTVGGSVIPLRIMKTDSIASVKLRIQTFKGFFVKKQKLVFEGKELARNKSCIRDYGVGDGNILHLVLRLSDLKAITVKTVCGKEFALYVEKSRSVGYVKQQIAKKGQGLVDLKDQELICEGEALEDQRLIEDICKDNDAVIHFLVRISDAKVRTKPVEKDFELSIEASYVHNLVSNLHADQLGPVSVTNEILERNQLSRDYLVEPIIMNSNMKIPPVIHKIIKMTLEGLENGCKPIQSPEGSGGAYLMQDSSGLKYISVFKPIDEEPMAINNPRGLPISEDGEGLKKGTRVGQGALREVAAYILDHPRKGPRSYHNNDEPGFAGVPPTVLVKCLHKGFHNVEDYQNVSGNAKIGSLQMFMRNIGSCEDIGPSAFPVEEVHKISVLDIRLVNADRHAGNILISKDGEDGHTILIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSADTIDYIKSLDAEEDIKLLKFHGWDLPPKCAQILRISTMLLQKGAERGLTPFAIGSIMCRETLKKKSVIEEIVQEAEEAAFPGASEAAFLDLVSVIMDCHLDELFQ 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02184 584 ProSiteProfiles Ubiquitin domain profile. 108 185 IPR000626 GO:0005515
Viun9g02184 584 Pfam Ubiquitin family 110 181 IPR000626 GO:0005515
Viun9g02184 584 Pfam Ubiquitin family 38 104 IPR000626 GO:0005515
Viun9g02184 584 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 267 566 IPR000403 -
Viun9g02184 584 Pfam Phosphatidylinositol 3- and 4-kinase 276 531 IPR000403 -
Viun9g02184 584 SUPERFAMILY Protein kinase-like (PK-like) 418 582 IPR011009 -
Viun9g02184 584 SMART ubq_7 32 103 IPR000626 GO:0005515
Viun9g02184 584 SMART ubq_7 108 181 IPR000626 GO:0005515
Viun9g02184 584 ProSiteProfiles Ubiquitin domain profile. 30 103 IPR000626 GO:0005515
Viun9g02184 584 FunFam Phosphatidylinositol 4-kinase gamma 4 29 108 - -
Viun9g02184 584 Gene3D - 30 106 - -
Viun9g02184 584 CDD Ubl_ubiquitin_like 110 177 - -
Viun9g02184 584 Gene3D - 109 198 - -
Viun9g02184 584 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 41 557 IPR044571 -
Viun9g02184 584 SUPERFAMILY Ubiquitin-like 105 183 IPR029071 -
Viun9g02184 584 SUPERFAMILY Ubiquitin-like 37 105 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02184 Viun-Chr9 31333661 31337705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02184 1 581 Acyl Lipid Metabolism Gene Families AT5G24240 60.481 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02184 - - gmx:100812724 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02163 10 36459715 36462942 Viun9g02184 9 31333661 31337705 ECH
Viun9g02184 9 31333661 31337705 Viun9g02184 9 31333661 31337705 ECH