Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01890 ATGTCTTCTCCTCTCCATTTGCCCGAACTCCATTTTCTCTCTCCTCAAATCACCCACAAACGCCGTATTTCCCTCTCTAAACTCCCCTCCTCAGCTTATTCCTTTTCCCGCCACGCCGCCTCCAACGTCACTCTCCGCGCCGCGCGAATCCGCGCCTCCAGAGATGATTCAGCGGTGGCTGAGCGAGTGGATGACGTCAAATGGAGCGGAAACGGCGCTCCTGCCGCTAATGGAAAGGACCGAGATGTTGCCGACGGCAATGGCGCTGTCGAGCGATTCGCTAACGGCGCCAGTAATGGGAGCTTGGTGACGTACGGTTACGAAAACGGAAACGGAGTTGCTACGGAGGTGGTGGTGGAGGTTGAAGCGTCCAAGCGGAACGAGGATGGGAGGAAGAAAAGGTTGGAGGAAATTGGGAAAGAAGACGCGTGGTTTAAACAGACCGGGAGCGAACAAGTCGAGGTGGCAGTTGCGCCTGGGGGTCGTTGGAGCAGGTTCAAGACTTACTCTACAATACAAAGAACTTTGGAAATTTGGGGATTTGTTGCCACGTTCGTTTTTAAGGCTTGGCTGAACAGCCAGAAGTTCTCTTACAAAGGAGGAATGACTGAGGAGAAGCAAACCTTAAGGCGGAAGGCCCTTGCCAAATGGCTGAAGGAAAGCATCCTGAGATTAGGTCCTACATTCATCAAAATTGGCCAGCAGTTCTCCACGAGGGTGGACATTCTTCCTCAAGAATACGTTGACCAGTTGTCCGAACTTCAGGATCAAGTTCCTCCATTCCCTTCAGAGACCTCTGTAGCTATTGTTGAAGAAGAGCTTGGATCTCCTATAGGTGATATATTTGATCAGTTTGACTATGAACCAATAGCTGCTGCTAGTCTTGGTCAGGTTCATCGTGCAAGATTAAAGGGACAGGAGGTTGTTATTAAAGTGCAAAGGCCTGGTCTGAAGGATCTTTTTGATATTGATCTTAAAAACCTGAGGGTTATTGCTGAATATCTTCAAAAGCTTGATCCAAAATCAGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAGTGTGCCTCTGTCTTATATCAGGAGATTGATTACACGAAGGAGGCTGCTAATGCAGAATTGTTTGGTAGTAACTTTAAGAACATGGATTATGTGAAAGTTCCTACAATATACTGGGATTATACAACACCACAGATTCTGACAATGGAATATGTTCCAGGAATTAAAATAAACAAAATACAAGCTTTAGATCAATTGGGTGTTGACCGCAAAAGGATAGGAAGATATGCCGTTGAGTCATACTTGGAACAAATTTTATCACACGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTCTATGATTTTGGAATGATGGGGAGTATCAGTCCAAACATTCGAGAAGGTTTGCTTGAAGCATTTTATGGGGTTTATGAGAAAGATCCAGACAAGGTTCTACAAGCAATGATTCAAATGGGAGTTCTTGTCCCTACTGGAGATATGACTGCTGTTAGAAGAACAGCACAATTTTTCCTTAACAGTTTTGAAGAGCGCCTCGCTGCACAGAGGCTTGAGAGAGAAGCAGCAACAACTGAACTTGGATTCAAAAAACCATTAAGCAAGGAGGAAAAAATTAAGAAGAGGAAACAACGTCTGGCTGCTATTGGTGAAGATTTATTATCTATTGCGGCAGACCAGCCATTCCGGTTTCCTGCTACATTCACATTTGTTGTTAGAGCCTTCTCAGTGTTGGATGGCATTGGAAAGGGACTCGACCCACGCTTTGACATTACTGAGATTGCCAAACCTTACGCCCTGGAGTTGCTGAGGTTCCGTGAAGCTGGGGTTGAGGTTGTCCTGAAGGACTTCAGGAAGAGATGGGATAGACAATCTCAAGCATTTTACAATTTGTTCAGACAGGCTGATAGAATTGACAAGCTTGCTGAAATTATCCAAAGACTGGAGCAAGGTGATCTAAAACTCCGAGTTAGAACTTTGGAATCTGAGAGGGCATTCCAACGAGTCGCTGCAGTCCAGAAGACTATAGGAAATGCAGTGGCTGCTGGGAGCCTAATCAATCTTGCAACTGTTTTGTATCTGAATTCAATTCGTGTGCCTGCCATTGTAGCATATATCTTCTGTGCAATCTTTGGTTTTCAAGTGCTCTTTGGCATTGTAAAGGTCAAGAAGCTAGATGAACGGGAACGATTGATAACAGGAACTGCATAA 2268 0.4506 MSSPLHLPELHFLSPQITHKRRISLSKLPSSAYSFSRHAASNVTLRAARIRASRDDSAVAERVDDVKWSGNGAPAANGKDRDVADGNGAVERFANGASNGSLVTYGYENGNGVATEVVVEVEASKRNEDGRKKRLEEIGKEDAWFKQTGSEQVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVATFVFKAWLNSQKFSYKGGMTEEKQTLRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETSVAIVEEELGSPIGDIFDQFDYEPIAAASLGQVHRARLKGQEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKLDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFGSNFKNMDYVKVPTIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRIGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRLEREAATTELGFKKPLSKEEKIKKRKQRLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVVLKDFRKRWDRQSQAFYNLFRQADRIDKLAEIIQRLEQGDLKLRVRTLESERAFQRVAAVQKTIGNAVAAGSLINLATVLYLNSIRVPAIVAYIFCAIFGFQVLFGIVKVKKLDERERLITGTA 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01890 755 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 129 711 - -
Viun9g01890 755 Pfam ABC1 atypical kinase-like domain 253 501 IPR004147 -
Viun9g01890 755 Coils Coil 525 545 - -
Viun9g01890 755 SUPERFAMILY Protein kinase-like (PK-like) 255 497 IPR011009 -
Viun9g01890 755 CDD ABC1_ADCK3-like 254 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01890 Viun-Chr9 28719482 28732336 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01890 - - gmx:100791330 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01890 9 28719482 28732336 Viun9g01890 9 28719482 28732336 ECH
Viun9g01890 9 28719482 28732336 Viun8g00891 8 8790857 8800238 PCT