Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00891 ATGGATTCCATCTACGCGAGCTCCTCGTGCACGGTTCCCCACCTTCTCCGTCGCGACACTCTGCTCTTGCCGCCGCGAACCTCTAATTTGACTGCTCCATCTTCGCTTCAGCGGACGAAAAGGGCGCGGCGCGTGCGGATTTCGAGTTCCGCGGCGACGAACGGCGCCGTTTCGAGGGCGCTGCAGGGAGTGAGCAGCACTGCGCTGGAGCAGCTCGATATCGAGCGTGGCGTCTGCATCCCTTTCCGCAAGTACTCGCCCGAGATCGTGAGGAATAAAGTGTTAGAATCAAGAGGATCCATTTTGTCACTTATGTTGCGGGGAGTGGAGATAGTTTGGAATCTGGGCTTGTACTGGTCTAACTTGGTGTATGATTTCTTGGTTGGAAGGGATGAAGAGGTTGTTCCATATCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGGCCTTCCTTTATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCAGATATTATTCGAGAAGATTATATGAATGAACTCTGCATCCTTCAAGATGATGTTCCTTCATTTCCAAATCAAATTGCCTTCAGAATCATAGAGGAGGATCTGGGTCAACCCCTTGAAGCTGTTTTCAGCAAAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGGGCAACATTGCGTGCCACCGGCGAGGATGTTGCTATCAAGGTTCAGAGGCCGGGGATAGAGCCTATTATATATCGGGATCTTTTCCTATTCCGCACTCTGGCTTCATTCTTAAATGGCATCAGTATGCAGAAGCTGGGATGTAATGCTGAGCTGATTGTTGATGAATTTGGTGAAAAGCTTTTGGAAGAGCTTGATTATACCCTGGAAGCCCGAAATCTTGAAGATTTCCTTGAGAATTTTAAAAATGACCCTACAGTCAAAATTCCCAGGGTTTACAAACAATTTTCTGGTCCTCGTGTGCTGGTAATGGAATGGATTGATGGTATCAGGTGCACCAATCCACAGGCTATCAAAGAAGCTGGTCTTGATGTAGATGGATTTTTAACAATTGGGGTGAGTGCTGCCCTACGACAATTGTTGGAATTTGGATTATTTCATGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGGCGAATTGCATATGTGGACTTTGGCAATGTTGCTGTTCTCAGTCAGCAAAATAAACAGATCTTAATTGATGCTGTTGTCCACGCTGTGAATGAGGACTATGCTGAAATGGCTAATGATTTCACCAGATTAGGCTTCCTGTCACCAGGGACTGATGTCACTCCCATAATTCCTGCTTTGGAAGCAATTTGGCAGAACTCAGCCGGAAAAGGACTGTCAGATTTTAATTTTCGTAGTGTCACTGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATTCCAGAAAGGTTTTCACTTGTAATTCGATCCTTATTGACCCAAGAAGGCATCTGTTTTACGCTGAAACCTGACTTCAAATTTCTTGAGGTTGCGTATCCTTATGTGGCTAAGCGACTATTGACAGACCCAAATCCAGCTCTGCGTGAACGCCTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTGGCGAAAATGAGTAACAATCCAGCATTGAAAGTGAAAGACACGCAAATCCAGAGAAACTGGAAAGTTGAAAGAAAATTGGACCTCACTGACACAATCAAAGATGGGGCTCGCCTCTTCTTTGTTGATGAAGGAATACGTAGACAGCTTCTTCTTGCTTTGACTGAGGATTCAAAGCTTCATATTGAAGAGCTCGTCGATGTGTATAGGTTGGTTGAAGATCAGATAGACATCCCATCTGTGGCCGTAGAAGTAGCTAGAGACTTACCAACAGTTGTGAGGGATCTCCTACTTTCATGGAGTGAGTCAGTCTTGTCTGATAGATAG 1989 0.4525 MDSIYASSSCTVPHLLRRDTLLLPPRTSNLTAPSSLQRTKRARRVRISSSAATNGAVSRALQGVSSTALEQLDIERGVCIPFRKYSPEIVRNKVLESRGSILSLMLRGVEIVWNLGLYWSNLVYDFLVGRDEEVVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPSFPNQIAFRIIEEDLGQPLEAVFSKISSETIAAASLGQVYRATLRATGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISMQKLGCNAELIVDEFGEKLLEELDYTLEARNLEDFLENFKNDPTVKIPRVYKQFSGPRVLVMEWIDGIRCTNPQAIKEAGLDVDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLSPGTDVTPIIPALEAIWQNSAGKGLSDFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSNNPALKVKDTQIQRNWKVERKLDLTDTIKDGARLFFVDEGIRRQLLLALTEDSKLHIEELVDVYRLVEDQIDIPSVAVEVARDLPTVVRDLLLSWSESVLSDR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00891 662 CDD ABC1_ADCK3-like 178 424 - -
Viun8g00891 662 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 82 622 - -
Viun8g00891 662 ProSiteProfiles Protein kinase domain profile. 208 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g00891 662 SUPERFAMILY Protein kinase-like (PK-like) 179 417 IPR011009 -
Viun8g00891 662 Gene3D Transferase(Phosphotransferase) domain 1 205 406 - -
Viun8g00891 662 Pfam ABC1 atypical kinase-like domain 178 422 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00891 Viun-Chr8 8790857 8800238 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00891 - - gmx:100819754 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00891 8 8790857 8800238 Viun8g00891 8 8790857 8800238 ECH
Viun9g01890 9 28719482 28732336 Viun8g00891 8 8790857 8800238 PCT