Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01813 ATGAGAGGAACAATGGGTGCTTCTCCTCATTCTGTTGAAGCTAGACACCGTTTACCAGCATCCATTGAAGATTTATACAAACGAAGATTGCCAAGAAGCAAAGCAAAAGATGCAGACAAGCCTTTCCATTTATCAGTCCAAGATAGAAGTTCAAGATGCAAGTTGTCTTTCTTAAAACTCATACTATTGATAACCATAAGTGGCACTTTTGTAACACTTCTCTATTCTCCAGAGGTTTACAATACCAACCATTTATCAACCTCAGGCTCTCGGTGGATATGGGGTGGCTCAGATCCTCGTTACATATCCAATGTAGACACTGACTGGGATGACATACTGAAAATTACTGATAAGTTGACAGCGCAAGACGAACTTCAAGGAATTGGGCTTGTAAATTTCAACAAGACAGAACAAGTCCATTGGGAACATCATATTCCTGATGCAACACATGTTGTTCTGCCTCTGGAGTATGCTGCAAGAAATGTGACATGGGAATCCTTGTACCCAGAATGGATTGACGAGGAAGAAGAAACTGAAGTTCCTGTGTGTCCTTCTCTGCCTAGTATTAGACCCCCAGGCATAAGACTCAACCTCATCGCCGTGAAGCTTCCTTGCAGGAATGGAGGGAACTGGTCCAGAGACGTTGCTCGTCTGCATCTTCAGCTTGCAGCTGCTGGCCTTGCAACCTCTTTCAAAGGAAACTACCCCGTTTATGTGCTCTTCATCACCAACTGTTTTCCAATTCCAAATCTTTTTTCATGTAAAGAACTGGTTGGACGCGAAGGGAATGTGTGGTTATACAAACCAAACTTGAGTGTGTTGAGAGAAAAAGTTCAGCTTCCAGTAGGGTCTTGTGAACTTGCACTTCCAATGAGAGGCAAAGAGTTGGCTTACAATGGGAATGCTCCTAGAGAAGCCTATGCAACAATTCTGCACTCAGCTCATGTTTACGTTTGTGGGGCCATAGCTGCTGCACAAAGCATCCGCATGTCTGGATCAACTCGAGATTTTGTGATACTTGTTGATGAGACGATCAGTGGGTATCACAGAAGTGGTTTGGAAGCAGCAGGGTGGAAAGTTAGAACAATTCAAAGAATCAGAAACCCCAAAGCTGAAAAAGATGCTTACAATGAGTGGAACTACAGCAAGTTCAGGCTGTGGCAGTTGACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTGATACTGAGAAACATAGATTTCCTATTTGGAATGCCAGAAATCACCGCCACTGGAAACAATGCCACGCTCTTCAACTCCGGTGTCATGGTGGTTGAGCCATCAAACTGCACGTTCCAGCTCCTGATGGATCACATAAACGAGATTGAGTCCTACAACGGAGGGGACCAAGGATATTTGAATGAAATATTCACGTGGTGGCACAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGATTGGTGATGAGGAAGAGAAGAAACAGATGAAGACTTTGTTGTTTGGCGCTGAGCCTCCAATTTTGTATGTGCTGCATTATCTAGGTGTGAAGCCATGGTTATGCTTCCGGGACTATGATTGCAACTGGAATGCTGATATCTTTCATGAGTTTGCAAGTGATGTTGCGCATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTGCAGCAGTTTTGTCTGCTGAAATCGAAGCAGAAGGCACAGTTGGAGTGGGATCGTAGGCAGGCTGAAATTGCAAACTACACGGACGGCCATTGGCGAAGAAAAGTTAAAGATAGACGCTTGAAGAAATGTATAGATAATTTGTGCAACTGGAAAAGCATGTTGCGGCACTGGGGAGAGACAAATTGGACAGATGATGAGTTTTATACTCCAACACCACCTACCATTACCACAGCATCTCTTTCGGCTTTATGA 1914 0.4368 MRGTMGASPHSVEARHRLPASIEDLYKRRLPRSKAKDADKPFHLSVQDRSSRCKLSFLKLILLITISGTFVTLLYSPEVYNTNHLSTSGSRWIWGGSDPRYISNVDTDWDDILKITDKLTAQDELQGIGLVNFNKTEQVHWEHHIPDATHVVLPLEYAARNVTWESLYPEWIDEEEETEVPVCPSLPSIRPPGIRLNLIAVKLPCRNGGNWSRDVARLHLQLAAAGLATSFKGNYPVYVLFITNCFPIPNLFSCKELVGREGNVWLYKPNLSVLREKVQLPVGSCELALPMRGKELAYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDFVILVDETISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTLLFGAEPPILYVLHYLGVKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPELLQQFCLLKSKQKAQLEWDRRQAEIANYTDGHWRRKVKDRRLKKCIDNLCNWKSMLRHWGETNWTDDEFYTPTPPTITTASLSAL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01813 637 FunFam Hexosyltransferase 302 554 - -
Viun9g01813 637 SUPERFAMILY Nucleotide-diphospho-sugar transferases 304 550 IPR029044 -
Viun9g01813 637 PANTHER GLYCOGENIN SUBFAMILY MEMBER 211 597 - -
Viun9g01813 637 Pfam Glycosyl transferase family 8 311 517 IPR002495 GO:0016757
Viun9g01813 637 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 303 552 IPR029044 -
Viun9g01813 637 CDD GT8_Glycogenin 305 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01813 Viun-Chr9 27701536 27706389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01813 13 637 Glycosyltransferase AT3G18660 66.822 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01813 K20890 - gmx:100809361 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01813 9 27701536 27706389 Viun9g01813 9 27701536 27706389 ECH
Viun9g01813 9 27701536 27706389 Viun3g00865 3 5336887 5340627 ECH
Viun3g00865 3 5336887 5340627 Viun9g01813 9 27701536 27706389 PCT