Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01663 ATGGCAGCTGAGCTAGTCAATGGTGCAACAAGCGAGAAACTAGCTGAAACTGATTGGGCAAAAAATATTGAAATCTGTGAGCTAGTTGCTCATGATAGAAGGCAAGCTAGAGATGTTGTCAAAGCTATAAAAAAGAGACTAGGAAGTAAACACCCTGATACTCAACTTTATGCTGTCATGTTGCTGGAAATGTTGATGAACAATATTGGAGAGCATATTCATGAGCAGGTGATTGATACTGGAATCATTCCCATTCTAGTAAAAATTGTGAAGAAAAAGTCTGATTTGCCTGTGAGGGAGAGGATCTTTCTCCTATTAGATGCCACACAAACATCCCTTGGTGGTGCGTCTGGAAAGTTTCCACAGTATTATAATGCATATTATGAGTTGGTGAGTGCCGGAGTGCAGTTTTCTCAAAGGGATCAAGTGGTCCAATCAAACCATCCTAGTTCACAACCTAGCAGGACTAATAATGTACCAAACAGGGAGCAGGCTGCACCTAGACATGAAGCAGTTGCTCCGCAAGCTGAGTCCCAGACTGTCCCTGAATCTAGCATTATTCAAAAGGCTAGCAATGCATTAGAAGTACTAAAAGAGGTCCTGGATGCTGTTGATGCTCAAAATCCTCAGGGAGCAAGGGATGAATTCACCCTTGACCTTGTAGAACAATGTTCTTTTCAAAAGCAAAGGGTTATGCATCTTGTGATGGCTTCTCGAGATGAAAGGATAGTTTCTCGGGCAATTGAATTGAATGAGCAACTTCAGAAAGTTCTCACAAGACATGATGACCTTCTTGCTGGCAGAACTACAGCAACAGCAACTCGGTTCAACCATGAGGAAGCAGAGGAAGAAGAGGAGCCTGAACAGTTAGTCCGAAGATTACGTAAGGGAAAGGCTTGTGCAAGACCTGAAGATGAGGAGACAGAAACAGACAACCCTCCCTTGGGTTTACTTGGGGAGAGACTCAATCGTCCACTAATAAGACCACTCTCAATAGAGCCACAATCTCGACATGCTGAAACTCGATCTCCACCTGTTGTCATCCTGCCATCACCTGAAGCCGACACTCGATCTCCACCTGTCGTGATCCCACCACCACCACCACGGCCGAAACAGAACGGTGATGTTTCTAATCATGTGGCAATTCCACCACCACCTGCAAAGCATGTCGAGAGGGAGAAGTTTTTTCAGGAAAACAAGGATGGTTCTAATTTGTCTGGCCACATGAGAGGCCTCTCCTTGCATAGTCGTAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGAATGA 1296 0.446 MAAELVNGATSEKLAETDWAKNIEICELVAHDRRQARDVVKAIKKRLGSKHPDTQLYAVMLLEMLMNNIGEHIHEQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYELVSAGVQFSQRDQVVQSNHPSSQPSRTNNVPNREQAAPRHEAVAPQAESQTVPESSIIQKASNALEVLKEVLDAVDAQNPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLTRHDDLLAGRTTATATRFNHEEAEEEEEPEQLVRRLRKGKACARPEDEETETDNPPLGLLGERLNRPLIRPLSIEPQSRHAETRSPPVVILPSPEADTRSPPVVIPPPPPRPKQNGDVSNHVAIPPPPAKHVEREKFFQENKDGSNLSGHMRGLSLHSRNGSSSHSGSFDFSE 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01663 431 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Viun9g01663 431 MobiDBLite consensus disorder prediction 141 184 - -
Viun9g01663 431 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Viun9g01663 431 SUPERFAMILY GAT-like domain 143 267 - -
Viun9g01663 431 MobiDBLite consensus disorder prediction 357 372 - -
Viun9g01663 431 MobiDBLite consensus disorder prediction 287 309 - -
Viun9g01663 431 MobiDBLite consensus disorder prediction 400 431 - -
Viun9g01663 431 Gene3D - 176 275 IPR038425 -
Viun9g01663 431 Coils Coil 187 207 - -
Viun9g01663 431 MobiDBLite consensus disorder prediction 141 163 - -
Viun9g01663 431 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Viun9g01663 431 SUPERFAMILY ENTH/VHS domain 4 138 IPR008942 -
Viun9g01663 431 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Viun9g01663 431 CDD GAT_GGA-like_plant 186 264 - -
Viun9g01663 431 CDD VHS 2 130 - -
Viun9g01663 431 Pfam VHS domain 5 111 IPR002014 GO:0035091|GO:0043130
Viun9g01663 431 Gene3D - 2 136 IPR008942 -
Viun9g01663 431 PANTHER TOM1-LIKE PROTEIN 1 417 IPR044836 GO:0035091|GO:0043130|GO:0043328
Viun9g01663 431 MobiDBLite consensus disorder prediction 276 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01663 Viun-Chr9 25100152 25106513 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01663 - - pvu:PHAVU_009G157500g 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01663 9 25100152 25106513 Viun9g01663 9 25100152 25106513 ECH
Viun3g00758 3 4678304 4683364 Viun9g01663 9 25100152 25106513 PCT