Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00758 ATGCAGGCTAGAGATGTCGTCAAAGCTATAAAAAAGAGGTTGGGTTACAAGAACCCTAATATTCAACTTTATGCAGTCTTGTTGCTAGAAATGTTGATGAACAATATTGGAGATCATGTTCACCAGCAGGTGATTGATACAGGAATCATCCCTATTCTTGTAAAAATTGTGAAGAAAAAATCAGATTTGCCTGTAAGGGAGCGGATATTTCTGCTACTAGATGCCACACAAACATCCCTTGGTGGTGCTTCTGGAAAGTTCCCACAGTATTATAATGCATATTATGATTTGGTGAGTGCTGGGGTGCAGTTTCCTCAAAGGGATCAAGTTACCCCATCAAATCGTCCTCATTCTCAACTTAATGAGATTAACAATGTACCGAACACAGATCAGGCCCCGACCAGACATCATCAAGCAGAGTCCCAAACGGTTGCTGAATCTAGCATTATTCAGAAGGCTTGTAATGCGTTAGAAGTTTTAAAAGAAGTCCTTGATGCCATTAATGCCCAACATCCTAAGGCAGCAAAAGATGAATTCACTCTTGATCTTGTTGAGCAGTGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTAATGACATCTCGTGATGAGAGGATAGTTTCTCGAGCAATTGAATTAAACGAGCAACTCCAGAAGGTTCTTACAAGACATGATGCACTTCTTTCGGGCAGAGCCATGACAATAGCTAATCACTTGGAGTGTGAAGAAGCAGAAGAGGAAGAAGAACCAGAACAGTTATTCCGGAGATTACGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGATGAAAAAAGGGAACCTGAGTTTCCTCACTTTGGTTTGCTTGAAGAGAGACTCAATCGTCCGTTAATAAGACCACTATCTTTAGAGCCATCTCGAGAAGCTAATAATTGTCCTGCACCTGCTGTGATTCCTCCTCACATGGCAATTCCACCACCACCTTCAAAACACATGGAGAGGGAGAGATATTTTCAGGAAAATAAAAAGGATGGTGCTACTTTGGCTGGCCACTTGAGAGGCCTTTCCTTGCATAGTCACAATGGCAGCAGTTCTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1101 0.4187 MQARDVVKAIKKRLGYKNPNIQLYAVLLLEMLMNNIGDHVHQQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVSAGVQFPQRDQVTPSNRPHSQLNEINNVPNTDQAPTRHHQAESQTVAESSIIQKACNALEVLKEVLDAINAQHPKAAKDEFTLDLVEQCSFQKQRVMHLVMTSRDERIVSRAIELNEQLQKVLTRHDALLSGRAMTIANHLECEEAEEEEEPEQLFRRLRKGKACARPEDEKREPEFPHFGLLEERLNRPLIRPLSLEPSREANNCPAPAVIPPHMAIPPPPSKHMERERYFQENKKDGATLAGHLRGLSLHSHNGSSSHSGSFDFSD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00758 366 Gene3D - 1 103 IPR008942 -
Viun3g00758 366 PANTHER TOM1-LIKE PROTEIN 2 264 IPR044836 GO:0035091|GO:0043130|GO:0043328
Viun3g00758 366 MobiDBLite consensus disorder prediction 108 141 - -
Viun3g00758 366 Pfam VHS domain 2 78 IPR002014 GO:0035091|GO:0043130
Viun3g00758 366 CDD VHS 2 97 - -
Viun3g00758 366 Gene3D - 139 237 IPR038425 -
Viun3g00758 366 MobiDBLite consensus disorder prediction 349 366 - -
Viun3g00758 366 MobiDBLite consensus disorder prediction 320 334 - -
Viun3g00758 366 SUPERFAMILY ENTH/VHS domain 2 107 IPR008942 -
Viun3g00758 366 SUPERFAMILY GAT-like domain 108 231 - -
Viun3g00758 366 ProSiteProfiles VHS domain profile. 1 105 IPR002014 GO:0035091|GO:0043130
Viun3g00758 366 Pfam GAT domain 157 230 IPR004152 GO:0035091|GO:0043130
Viun3g00758 366 CDD GAT_GGA-like_plant 149 227 - -
Viun3g00758 366 ProSiteProfiles GAT domain profile. 141 229 IPR004152 GO:0035091|GO:0043130
Viun3g00758 366 MobiDBLite consensus disorder prediction 307 366 - -
Viun3g00758 366 Coils Coil 150 170 - -
Viun3g00758 366 SMART VHS_2 1 101 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00758 Viun-Chr3 4678304 4683364 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00758 - - gmx:100802949 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00758 3 4678304 4683364 Viun3g00758 3 4678304 4683364 ECH
Viun3g00758 3 4678304 4683364 Viun9g01663 9 25100152 25106513 PCT