Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01660 ATGAGAGCTTATGCTACCAAATGCTTCTCTTCATCCACTTTTTTGTCTTTTCTTCACTTTGTGGTTCTTTTCTTTATAACTTCACTAGTTCTTGTTTCTTGTCGGAGTCTTCTTGCTCCTTTCTATACACCTCATGTTTGTCGGAGGGGACAACCAACTTCATCTTTGGATGCAGAAAAGAGAAGAGTTTCGATATTACATGATGAAAGAGAGACTCCATCTCCAACTGCATTTTTCAATGAAGGTGATGAAAAGCTTGACACCAAGTTTGTGCAAAAAGGTACGGATAAAGAGTACTTTAAAGGACAAAAGTACAGCGAGTTAAGAAGAATTGAAGAAAAATTGGCCAAAGCAAGGTATTCAATCAGAGAAGCTAGCAAAATTCGAAATTTGACATCAACCCTCCAAGATCCAGACTATGTTCCTCAAGGTCCAATTTACAGAAACGCCAATGCCTTTCATAGGAGTTACTTAGAGATGGAAAAGGTGTTCAAGGTTTTTGTGTATGAAGAAGGGGAGCCACCATTGTTCCATAATGGTCTAAGCAAAGACATATATGCCACTGAGGGGAGATTCATAAATGAAATGGAAAAGGGGAGGCACTATCGTACTTATGATCCAGACGAAGCTTTTGTGTATTATTTGCCCTTCAGTGTGGTTATGTTGGTCGAATATGTGTACGATCGTGGCTCCAATTATAATCGAGATCCCCTTGGCCTTGTTGTAAAAGACTACATACAGACTATAGCTTATAAACATCCCTTCTGGAATCGGTCTCTGGGCCATGATCATTTCATGCTCTCTTGCCATGATTGGGGTCCAATTGTATCTAGTTACGTGGATCTCTTGTATAACAATGCCATAAGGGTTCTTTGCAACGCAAATACATCTGAAGGATTCAAGCCTTCAAAGGATGTGTCATTTCCAGAGATTAAACTTATGGACGGGGAAGTCACTGGTCTAGTGGGAGGGTATCCACCATCTCAAAGGACCATCCTTGCTTTCTTTGCAGGTCACCTGCATGGCTATATAAGATACTTGCTCCTACAGACATGGATAAACAAAGACCAAGATGTGCAAGTTTATGAGGAAATTCCTGAAGGAATGTCTTACTACACAAAGCTTAGAAGCAGCAAGTTTTGCCTTTGCCCAAGTGGTTATGAAGTTGCCAGTCCCAGAATAGTGGAAGCAATATTTGCAGAATGTGTGCCAGTATTGATTTCTGATAGCTATGTTCCACCCTTCAGTGATGTGTTGAATTGGAATTCATTTTCAGTTCAAGTGGCTGTGAAAGAAATTCCCAACATCAAAAAGATACTCATGGGCATTTCAGAAAGCCAGTACTTGAGGATGCAAAGGAGGGTGAAACAAGTGCAAAGACATTTTATGCCTAATGAGCCCCCAAAGAGATATGATATGTTCCATATGACTGTCCATTCCATTTGGCTCAGGAGGTTAAATATCCATATTCAAGATCAGTAA 1482 0.4022 MRAYATKCFSSSTFLSFLHFVVLFFITSLVLVSCRSLLAPFYTPHVCRRGQPTSSLDAEKRRVSILHDERETPSPTAFFNEGDEKLDTKFVQKGTDKEYFKGQKYSELRRIEEKLAKARYSIREASKIRNLTSTLQDPDYVPQGPIYRNANAFHRSYLEMEKVFKVFVYEEGEPPLFHNGLSKDIYATEGRFINEMEKGRHYRTYDPDEAFVYYLPFSVVMLVEYVYDRGSNYNRDPLGLVVKDYIQTIAYKHPFWNRSLGHDHFMLSCHDWGPIVSSYVDLLYNNAIRVLCNANTSEGFKPSKDVSFPEIKLMDGEVTGLVGGYPPSQRTILAFFAGHLHGYIRYLLLQTWINKDQDVQVYEEIPEGMSYYTKLRSSKFCLCPSGYEVASPRIVEAIFAECVPVLISDSYVPPFSDVLNWNSFSVQVAVKEIPNIKKILMGISESQYLRMQRRVKQVQRHFMPNEPPKRYDMFHMTVHSIWLRRLNIHIQDQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01660 493 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 26 481 IPR004263 GO:0006486|GO:0016757
Viun9g01660 493 Coils Coil 108 128 - -
Viun9g01660 493 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Viun9g01660 493 Pfam Exostosin family 161 441 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01660 Viun-Chr9 25069481 25071636 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01660 - - gmx:112997610 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01660 9 25069481 25071636 Viun9g01660 9 25069481 25071636 ECH
Viun3g00708 3 4374314 4377823 Viun9g01660 9 25069481 25071636 PCT