Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00708 ATGGGTATGCGGAAATTGAGTCTTTTGGGGTTTCTTTGTGCCTATTCTTTCTTTACAATTGGTGCTGTGGAGCTGGGCAGGAACCAACCAACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTATATGAACTTCCAAGTAAGTATAATAAGAAAATTCTGCAAAAAGATCCGAGATGCCTCAACCATATGTTTGCTGCTGAAATCTTTATGCACCGGTTTCTCTTATCTAGCCCTGTCCGAACACTTAATCCGGAAGAGGCTGACTGGTTTTATACCCCTGTATACACCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTCAAGTCACCACGAATGATGAGAAGTGCCATACAACTTATTTCTTCAAACTGGCCCTATTGGAATCGCACAGAGGGAGCAGATCACTTCTTTGTGGTTCCTCACGACTTTGGGGCATGTTTTCATTACCAGGAAGAGAAGGCAATTGAAAGAGGGATTCTTCAACTGTTAAGGCGTGCTACATTGGTTCAAACATTTGGACAGAGGAATCATGTATGCTTGAAAGAGGGCTCAATTACCATTCCTCCATACGCTCCACCACAGAAAATGCACACCCACCTAATTCCTGATAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTCTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAAAACAATCCTCTATTTGATGTCTCCACTGAGCATCCAACCACGTACTACGAGGACATGCAACGAGCTGTGTTTTGCCTATGCCCACTTGGATGGGCTCCTTGGAGCCCAAGATTGGTAGAGGCTGTGATATTTGGTTGCATACCTGTTATTATTGCAGATGACATTGTTCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGAGTGTTTGTTGCTGAGGAGGAGGTTCCAAAGTTGGATACCATACTCACATCTATCTCACCACAAGTCATATTGAGGAAGCAAATATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAACCTGGAGATGCCTTCCATCAAGTTTTAAATGGACTGGCAAGGAAACTGCCACATGACAACACTGTGTTCTTGAAATCAGGGGAGAAGATCTTGAATTGGACTGCTGGACCTGTGAGTGACCTTAAACCTTGGTAA 1251 0.442 MGMRKLSLLGFLCAYSFFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILQLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDVSTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEEVPKLDTILTSISPQVILRKQILLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTVFLKSGEKILNWTAGPVSDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00708 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 382 IPR004263 GO:0006486|GO:0016757
Viun3g00708 416 Pfam Exostosin family 49 344 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00708 Viun-Chr3 4374314 4377823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00708 K20870 - gmx:100812747 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00708 3 4374314 4377823 Viun3g00708 3 4374314 4377823 ECH
Viun3g00708 3 4374314 4377823 Viun9g01660 9 25069481 25071636 PCT
Viun9g01602 9 23859092 23863674 Viun3g00708 3 4374314 4377823 PCT