Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01599 ATGGAGAGTGTTTTGAGCCCTGAACCATCACAGAAGTCACCTTTGGATTCCAGTTCCAAACAAGTCACAACCATTGAAGAACTGAAAGACAGCACCGATGCCGAACTCACCAAAATTCGTCTCATGCGGGCCTTTGTTGAAGCTCGAGATCCCTCTTCCAAGGAAGTGGATGATTTGATGATTAGAAGATTCTTGCGGGCTCGTAATTTAGATGTGGAGAAGGCTTCGGCAATGTTCCTGAAGTATTTGAAGTGGAAACGTTCGATTATGCCCAATGGTTATATATCGCCATCAGAGATTGCCGAAGATATTGCACATGAGAAGGTGTTTGTTCAAGGGCTCGACAAGAAGGGTCGACCTATAGTTGTTGCCTTTGCTGCAAAACATTTTCAAAGCAAAAATGGTGCCGATGGATTTAAACGTTATGTAGCATTTGCTCTTGAGAAGCTATGTTCAAGGATGCCGCCGGGGCAAGAAAAGTTTCTTAGCATTGCAGACATTGAAGGATGGGGATATGCAAACAGTGACCTTCGTGGATACCTTAATGCTCTATCCACTTTGCAGGATTGCTACCCTGAAAGATTAGGAAAGATGTTTATTGTACACGCACCATATTTGTTTATGAAAATTTGGAAAATGATTTACCCTTTCATTGATGACAACACCAAGAAAAAGATAGTATTCGTGGAGAACAAAAAACTGAAATCAACATTACTAGAAGAGATAGAAGAGAGTCAACTCCCAGATATATACGGAGGCCAAATGCCGTTAGTTCCTATCCAGGATAGCTGA 792 0.4179 MESVLSPEPSQKSPLDSSSKQVTTIEELKDSTDAELTKIRLMRAFVEARDPSSKEVDDLMIRRFLRARNLDVEKASAMFLKYLKWKRSIMPNGYISPSEIAEDIAHEKVFVQGLDKKGRPIVVAFAAKHFQSKNGADGFKRYVAFALEKLCSRMPPGQEKFLSIADIEGWGYANSDLRGYLNALSTLQDCYPERLGKMFIVHAPYLFMKIWKMIYPFIDDNTKKKIVFVENKKLKSTLLEEIEESQLPDIYGGQMPLVPIQDS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01599 263 Gene3D - 3 262 IPR036865 -
Viun9g01599 263 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 97 259 IPR001251 -
Viun9g01599 263 PANTHER OS03G0850700 PROTEIN 27 262 - -
Viun9g01599 263 Pfam CRAL/TRIO domain 106 253 IPR001251 -
Viun9g01599 263 SUPERFAMILY CRAL/TRIO N-terminal domain 26 94 IPR036273 -
Viun9g01599 263 SUPERFAMILY CRAL/TRIO domain 98 256 IPR036865 -
Viun9g01599 263 CDD SEC14 109 254 IPR001251 -
Viun9g01599 263 SMART sec14_4 103 256 IPR001251 -
Viun9g01599 263 MobiDBLite consensus disorder prediction 1 25 - -
Viun9g01599 263 SMART CRAL_TRIO_N_2 57 82 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01599 Viun-Chr9 23795691 23798222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01599 63 248 Acyl Lipid Metabolism Gene Families AT1G55840 25.837 3.05e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01599 - - gmx:100797666 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01599 9 23795691 23798222 Viun9g01599 9 23795691 23798222 ECH
Viun3g00702 3 4358932 4371929 Viun9g01599 9 23795691 23798222 PCT