Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01473 ATGGTGACAATGGAAGAAAGTCCACGGAGCCCAGAGGCGAAGGTGGGGTTGAGAGTGGAGGATCTATGGGACGTTCAGGAGCCACAGCTTAGTCCTGATGAAAAGCTCAATGCTTGCTTTGAGAGCATCCCTGTCTCTGCCTTTCCTTTACCTCCTTCAAATCAAGAAGTTGAGATAAAATCAGATACCAGTCTAGCAGAAGCAGTGAAATTGCTTGCACAACACAACATTCTCAGTGCACCTGTGGTGGATGTAGATGCTCCCGAAGATGCTAGTTGGATCGACAGATACATAGGAATAGTTGAGTTTGCTGGAATTGTTGTATGGATTCTGCATCAGTCTGATCCCACATCTCCTAGGAGTCCATCCAGTGGATCTGCTATTTCGGCTGCTGTCAATGGAATAACCTCTGCTTTTGAACATGAAGCCTCAGGCCTTGAATCTGCCATGACAACTTCAGGAAACTTTTTTGAGGATCTGACTTCTTCTCAACTTTATAAGGATACCAAGGTTGTGTGTTGGACTTATCAATGCAAACTAATAACAGGGTCATTCCGCTGGGCCCCCTTTCTCGCTTTGGAGAGATCAAACTCATTTTTGACCATGCTTTTGCTGCTTTCCAAGTACAAGATGAAGAGTGTTCCTGTTGTTGACTTAGGTGCAGGTCGAATTCAAAACATCATTACACAGTCTTCTGTCATTCACATGTTGGCAGAATGTGTTGGTCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAGCTATCTCAAGTTGGTCTTCCCATGGTCACACCAAATCATATTATAAAGGTTTATGAAGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGGATTGGGGGGTTGCCAGTGATGGAAAGGGGTGGCAGCAGGGCAATTGGTAACATCAGCCTGCAAGATGTTCAATTCCTCCTAACTGCTCCAGAAATCTACCATGACTATAGATCTATTACAGCAAAAGACTTCCTGACAGCAGTTAGAAGCTACTTAGAGAAGCATGAAGGGACCTTTCCAATGTCAGGTGAACTGATAACATGCAATAAGGATTGCACAATCAAAGAACTGATTCAACTGCTTGACCATGAGAAGATTCATAGGGTCTACGTTGCTGACAGTGATGGGAATCTTGAAGGACTGATCACGCTGAGAGATATCATCTCAAGGCTAGTACATGAGCCCCGTGGCTATTTTGGTGATTTCTTTGATGGGGTTCTCCCGATGCCTCCTAACAGCAGGGTTTGA 1269 0.4437 MVTMEESPRSPEAKVGLRVEDLWDVQEPQLSPDEKLNACFESIPVSAFPLPPSNQEVEIKSDTSLAEAVKLLAQHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSDPTSPRSPSSGSAISAAVNGITSAFEHEASGLESAMTTSGNFFEDLTSSQLYKDTKVVCWTYQCKLITGSFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIQNIITQSSVIHMLAECVGLQWFESWGTKKLSQVGLPMVTPNHIIKVYEDEPVLQAFKLMRKKRIGGLPVMERGGSRAIGNISLQDVQFLLTAPEIYHDYRSITAKDFLTAVRSYLEKHEGTFPMSGELITCNKDCTIKELIQLLDHEKIHRVYVADSDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01473 422 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 47 398 - -
Viun9g01473 422 ProSiteProfiles CBS domain profile. 348 406 IPR000644 -
Viun9g01473 422 SMART cbs_1 189 238 IPR000644 -
Viun9g01473 422 SMART cbs_1 351 399 IPR000644 -
Viun9g01473 422 SMART cbs_1 55 111 IPR000644 -
Viun9g01473 422 SMART cbs_1 266 315 IPR000644 -
Viun9g01473 422 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
Viun9g01473 422 ProSiteProfiles CBS domain profile. 261 323 IPR000644 -
Viun9g01473 422 CDD CBS_pair_SF 266 395 - -
Viun9g01473 422 SUPERFAMILY CBS-domain pair 30 238 IPR046342 -
Viun9g01473 422 Gene3D - 38 243 IPR046342 -
Viun9g01473 422 Gene3D - 251 401 IPR046342 -
Viun9g01473 422 SUPERFAMILY CBS-domain pair 261 408 IPR046342 -
Viun9g01473 422 Pfam CBS domain 267 310 IPR000644 -
Viun9g01473 422 Pfam CBS domain 57 102 IPR000644 -
Viun9g01473 422 Pfam CBS domain 348 399 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01473 Viun-Chr9 17579180 17582616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01473 - - gmx:100780629 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01473 9 17579180 17582616 Viun9g01473 9 17579180 17582616 ECH
Viun3g04290 3 50633123 50635998 Viun9g01473 9 17579180 17582616 PCT