Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01278 ATGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTGGAGGCAGAGTTTGCAAGGGAAGTGGTGAGGTTGCACACGGTGGTGGGAAATGCTGTGACAGAAGGGAGACACATTGTGGTTGGCACAGGTTCTTCTCAGCTTTTTCTGGCTGCTCTCTATGCTCTTTCCCCTACTGATGCACCTGAACCAATCAGTGTTGTCTGTGCCACACCCTACTACTCATCGTACCCATCAATGACGAATCACCTGAAATCAGGACTGTACCAATGGGGTGGTGATGCAGAAAGTTTTGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCTCCCAATAATCCTGATGGACATGCAAGAATATCTAAGGTCAACAGAAGCCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCACAGTACACTCCAATATCAGCACCTGCAGATCATGATCTTACCCTTTTCACTGTTTCAAAAAGTACTGGCCATGCTGGAATGCGCATAGGGTGGGCACTTGTGAAAGACAAAGAGGTGGCAAAGAAAATGACAAAATTCATAGAGCTGAACACAATTGGAGTGTCTAAGGATTCTCAACTCAGGGCAGCTAAGGTTTTAAGGGCAGTTTCTGACAGCTGGGAACAAGGAAACCCCCAAGAGGGGGAGTCATTCTTCAAGTTCAGCCACAAACTCATGGCAAACAGGTGGAAGCAACTTAGACTAGTGGTGGAGCATAGTGACTTATTCAGTTTGCCTAAATTTTCACCAGCATTCTGCACTTTTTTCAAAGAGGTCTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACGTTGAAGATTGCGAAAGCTTCCTTCGAGCACACAACATCTTAACTAGAAGTGGAAAACACTTTGGGGTTAGCCCAAAATACGTAAGAATTAGCATGTTGGATACTGATGAAAATTTTAGCCACTTTCTAGAGAGGCTTTCTTCCATAAAATCGTGA 993 0.4451 MSYFSDVTNICWFLEAEFAREVVRLHTVVGNAVTEGRHIVVGTGSSQLFLAALYALSPTDAPEPISVVCATPYYSSYPSMTNHLKSGLYQWGGDAESFEKEGPYIELVTSPNNPDGHARISKVNRSQGFLVHDLAYYWPQYTPISAPADHDLTLFTVSKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEQGNPQEGESFFKFSHKLMANRWKQLRLVVEHSDLFSLPKFSPAFCTFFKEVLEPQPAFVWLKCEGNVEDCESFLRAHNILTRSGKHFGVSPKYVRISMLDTDENFSHFLERLSSIKS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01278 330 Gene3D Aspartate Aminotransferase, domain 1 214 330 IPR015422 GO:0003824
Viun9g01278 330 Gene3D - 14 213 IPR015421 GO:0003824
Viun9g01278 330 Pfam Allinase 1 328 IPR006948 GO:0016846
Viun9g01278 330 CDD AAT_like 17 325 - -
Viun9g01278 330 SUPERFAMILY PLP-dependent transferases 8 327 IPR015424 -
Viun9g01278 330 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01278 Viun-Chr9 12672545 12676782 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01278 K16903 - gmx:100807013 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01278 9 12672545 12676782 Viun9g01278 9 12672545 12676782 ECH
Viun3g04388 3 51679368 51685105 Viun9g01278 9 12672545 12676782 PCT