Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04388 ATGGTTGCAGTTCCATCTCTGTTTTCCTTGAGGCACTTGCTGGTGCTGTCTCTCGCCCTCAATGTCAGTCTTATTCTTAGAACTCTATATCATGAGACTGGCGAAGGCAACAAATGGTGGTTTTGCTTCAAGAAGAAAATGATGGCAGATGCAGAATCATGTTTCACTACATCTCCCACCGCGTCTCTCCATAATTCTACTCGTGAAAACATCATCGACTTGGATCATGGTGACCCAACAATGTATGAGAGATTCTGGCGACAAATGGGTGACAAGACTACAATAACAATTCCAGGATGGCAATCAATGAGTTATTTATCTGAAGGGTCAAACATTTGCTGGTTTTTGGAGGCTGAGTTTGCAACGGAAGTAGTGAGGTTGCACAATGTGGTGGGCAATGCTGTGACAGAAGGTCGCCATATTGTTGTTGGAACAGGTTCCTCTCAGCTAATTCTGGCTGCCCTTTATGCTCTGTCCTCGCCTGATGCTGCTGAACCAATCAGCGTTGTATCTGCCGCGCCTTATTATTCGTCGTACCCCTCAATGACAGATTACCAGAAATCAGGCCTTTACCAATGGGCTGGTGATGCAGAGAATTTTGACAAAGAAGGTCCTTACATTGAGTTGGTTACTTCTCCCAATAACCCTGATGGATATAGAAGGAAATCAATGGTGAACCGAAGGCAGGGACTATTGATTCACGACCTTGCCTATTATTGGCCGCAATACACACCAATATCATCCCCTTCGGATCATGATCTCACGCTGTTCACTGCCTCAAAAAGCACTGGTCATGCTGGAATGCGCATAGGATGGGCTCTTGTGAAAGATAAAGAGGTAGCGAAGAAAATGACTAAATTCATAGAGCTAAATACAATTGGTGTGTCGAAGGATTCTCAACTGAGAGCTGCCAAGGTTTTAAAGGCTGTCTCGGAGAGCTGCAAAGAAGAAAAGCAGGAAAACGGGGGGGAATCTTTTTTCAAGTTCAGCTACAAGGTGATGGCACAAAGGTGGAAGCAACTGAGGGAAGTAGTTGATGGCGGTGATATGTTCTCATTGCCCCAATTTTCTCCCGCATTCTGCTCCTTCTTTGGTAAGGAGACGGAGCCTCAACCAGCTTTCGTGTGGTTGAAGTGCGAGGGAGATGTTGAGGACTGCGAGACCTTCCTTCGAGGATACAAAATTATAACGAGAAGTGGGACACAGTTTGGGGCTAGCCCAAAATATGTAAGAATTAGCATGTTGGATACAGATGAAACTTTTATACAGTTCATAGAGAGACTATCAGCCATACAGGAGCGAGAATGA 1308 0.4503 MVAVPSLFSLRHLLVLSLALNVSLILRTLYHETGEGNKWWFCFKKKMMADAESCFTTSPTASLHNSTRENIIDLDHGDPTMYERFWRQMGDKTTITIPGWQSMSYLSEGSNICWFLEAEFATEVVRLHNVVGNAVTEGRHIVVGTGSSQLILAALYALSSPDAAEPISVVSAAPYYSSYPSMTDYQKSGLYQWAGDAENFDKEGPYIELVTSPNNPDGYRRKSMVNRRQGLLIHDLAYYWPQYTPISSPSDHDLTLFTASKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLKAVSESCKEEKQENGGESFFKFSYKVMAQRWKQLREVVDGGDMFSLPQFSPAFCSFFGKETEPQPAFVWLKCEGDVEDCETFLRGYKIITRSGTQFGASPKYVRISMLDTDETFIQFIERLSAIQERE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04388 435 Pfam Allinase 72 431 IPR006948 GO:0016846
Viun3g04388 435 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 77 430 - -
Viun3g04388 435 Gene3D - 116 320 IPR015421 GO:0003824
Viun3g04388 435 SUPERFAMILY PLP-dependent transferases 60 431 IPR015424 -
Viun3g04388 435 Gene3D Aspartate Aminotransferase, domain 1 324 432 IPR015422 GO:0003824
Viun3g04388 435 CDD AAT_like 119 428 - -
Viun3g04388 435 Gene3D - 37 112 IPR037029 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04388 Viun-Chr3 51679368 51685105 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04388 K16903 - gmx:100777098 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04388 3 51679368 51685105 Viun3g04388 3 51679368 51685105 ECH
Viun3g04388 3 51679368 51685105 Viun9g01278 9 12672545 12676782 PCT