Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01258 ATGGGAATGAAAAGATATTCAGAACATAGCAATGATCCATTTTTTGTTGCAGCTCACAACAACAGAAGAAGACAACAACAGCAATGCACACAACCAGACAATAATGGTGTCCCAGAAGAGACATGTGCACAACAAAACCATTCTCCAAAATTGGCTTCTTTCACTTCCCAAAATGTTCCACTTCTCACAACTATACCTTCTTTTGTTGCCTTGCTGCTCCTCGTTTCTTCAATTGCCCCAGCAATGTGCCACTCTCTGCAGGGTAACCACACTTTTTTTAGGCCACACCATGAGCTCCTCAACTTGAGAAGAGTCAGGGCTCACTTGAACAAGATTAACAAGCCCCCTGTCAAGACAATTCAGAGTCCAGATGGTGATTTGATTGATTGTGTGTTATCTCACCTGCAACCAGCTTTTGACCATCCTATGCTTAGAAATCACACAGCATTGGATCCACCAGAGAGGCCAAGGGGAAAAAACCAGACCAAAGTAGATAGGGAAAATGAGAGCTTTCAGGTGTGGAGTGATTCTGGTGAAACATGCCCAGAAGGAACTGTACCAATCAGAAGAACAACAGAGGAGGATATTCTGAGAGCAAGTTCTATCCGAAGATTTGGAAGAAAACCAAGAACTGTACGGAGAGACTCATCTGGCAGTGGTCATGAGCATGCTGTTGTTTTTGTAAATGGTGAACAATACTATGGAGCAAGGGCAAGCATAAACGTGTGGGCACCAAGTGTGAGTGATGAATTTGAATTCAGCTTATCACAAATGTGGGTTATTGCTGGGTCCTTTGGTAAAGATCTGAACACCATAGAAGCTGGTTGGCAGGTGAGTCCCCAACTGTATGGAGACAACTATCCAAGGTTCTTCACTTATTGGACAACAGATGCATATCAAACAACTGGGTGTTACAATTTACTCTGTTCAGGCTTCATTCAAACCAACAATAGGGTAGCAATAGGAGCAGCAATCTCTCCAAGATCTGCTTACAACAGAAGACAGTTTGATATTAGCTTAATGATTTGGAAGGATCCAAAGCATGGACATTGGTGGTTGGAGTTTGGATCAGGAGTACTAGTGGGGTATTGGCCAGCAAACATGTTCAGTCACTTGAGGAGTCATGCAAGTATGGTGCAGTTCGGAGGAGAAATAGTGAACAGTCGTTCAAGGGGTTACCACACTGCCACACAAATGGGGAGTGGCCATTTTGCCGAAGAAGGGTTCAGAAAATCAGCATATTTTAGAAACTTGCAAGTCGTTGATTGGGACAATAGCTTGCTTCCTCTTAGAAACATTCATCATTTGGCTGATCATTCCAATTGCTACAACATTAGGCAAGGAACCAGCAATGTTTGGGGAACTTACTTTTACTATGGAGGTCCTGGAAGAAATGTCAGATGCCCATGA 1410 0.4319 MGMKRYSEHSNDPFFVAAHNNRRRQQQQCTQPDNNGVPEETCAQQNHSPKLASFTSQNVPLLTTIPSFVALLLLVSSIAPAMCHSLQGNHTFFRPHHELLNLRRVRAHLNKINKPPVKTIQSPDGDLIDCVLSHLQPAFDHPMLRNHTALDPPERPRGKNQTKVDRENESFQVWSDSGETCPEGTVPIRRTTEEDILRASSIRRFGRKPRTVRRDSSGSGHEHAVVFVNGEQYYGARASINVWAPSVSDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNRVAIGAAISPRSAYNRRQFDISLMIWKDPKHGHWWLEFGSGVLVGYWPANMFSHLRSHASMVQFGGEIVNSRSRGYHTATQMGSGHFAEEGFRKSAYFRNLQVVDWDNSLLPLRNIHHLADHSNCYNIRQGTSNVWGTYFYYGGPGRNVRCP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01258 469 Pfam Neprosin 252 462 IPR004314 -
Viun9g01258 469 MobiDBLite consensus disorder prediction 21 42 - -
Viun9g01258 469 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 105 465 - -
Viun9g01258 469 FunFam Putative carboxyl-terminal proteinase 242 361 - -
Viun9g01258 469 Pfam Neprosin activation peptide 119 226 IPR025521 -
Viun9g01258 469 MobiDBLite consensus disorder prediction 144 166 - -
Viun9g01258 469 MobiDBLite consensus disorder prediction 147 166 - -
Viun9g01258 469 Gene3D - 245 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01258 Viun-Chr9 12233202 12238793 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01258 - - gmx:100777828 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04392 3 51757652 51761356 Viun9g01258 9 12233202 12238793 ECH
Viun9g01258 9 12233202 12238793 Viun9g01258 9 12233202 12238793 ECH
Viun3g04392 3 51757652 51761356 Viun9g01258 9 12233202 12238793 PCT