Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04392 ATGGACATGAAGGGATATTCAGTTTCCTGGACAAAACATAAGAAAGAGCCATATTTTGCAGCTGGTCACACAAGAAGACAACAACAATGCATACAAGCAAATGATGATACCGCAGAAGAAACAAGTTTACTAAATCATTCCCTCAAATTGGCTCTTTCCACTTCCCAAAATACTCTACTCCCTACGCTACCTTCCTTTGTTGCTTTCCTCCTACTTCTTACTTCAATTGCCACCGCATTTTCTCACCCCATTCCCTCCAATTCACCATTGCCACCACCCTCTCACCCCACTGCTAACAACACTTTCACACCTTTGCACAAGTTGAGCAGAATCAGAGCTCACCTCAACAAGATTAACAAGCCTCCTGTTAAAACAATTAAGAGTCCAGATGGGGATTTGATAGATTGTGTTTTGTCTCATCAGCAACCTGCTTTTGACCATCCTCTGCTCAGAGGGCAAAGACCATTGGATCCACCAGAAAGGCCAAAGGGTCACCCCAATGGGGAAACAGTCATAGAGAGCTTTCAGCTTTGGACTGATTCTGGTGAAATATGCCCTCAAGGAACTGTTCCGATCAGAAGAACAACTGAACAAGATTTTCTACGAGCAAGCTCCATCAGAAGATTTGGAAGAAAAGTACGGAGGGACTCAACTGGCACCGGGCATGAGCATGCAGTTGTTTTTGTAAACAGAGATCAATACTACGGAGCAAAAGCAAACATAAATGTATGGACACCCAGCGTAACCGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCTTTTGGCAATGATCTGAATACCATAGAAGCTGGATGGCAGGTGAGTCCTGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGATGCATATCAAGCAACTGGATGCTACAACTTACTGTGTTCTGGATTTGTCCAAACTAACAACAGGATAGCAATAGGGGCTGCAATCTCTCCAAGATCCATCTACAATGCCAGACAATTTGATATTGGCTTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAATTTGGGTCGGGTCTACTTGTTGGGTACTGGCCAGCATACCTGTTCAGTCACTTGAGAAACCATGCTAGCATGGTACAATTTGGAGGAGAAATAGTGAATTCTCGTTCAAGGGGCTACCACACTGGCACTCAAATGGGTAGTGGCCATTTTGCAGAAGAAGGGTTTAGAAAAGCAGCTTATTTTAGAAACTTACAAGTTGTGGATTGGGACAATAACTTGCTTCCTCTTTCAAATATTCACCAATTGGCTGACCATTCCAATTGCTATGACATTAGGGTCGGATCAAACAATGTTTGGGGAACTTACTTTTATTATGGAGGTCCTGGAAGGAACGTAAGATGTCCATGA 1413 0.4331 MDMKGYSVSWTKHKKEPYFAAGHTRRQQQCIQANDDTAEETSLLNHSLKLALSTSQNTLLPTLPSFVAFLLLLTSIATAFSHPIPSNSPLPPPSHPTANNTFTPLHKLSRIRAHLNKINKPPVKTIKSPDGDLIDCVLSHQQPAFDHPLLRGQRPLDPPERPKGHPNGETVIESFQLWTDSGEICPQGTVPIRRTTEQDFLRASSIRRFGRKVRRDSTGTGHEHAVVFVNRDQYYGAKANINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIYNARQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPAYLFSHLRNHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRVGSNNVWGTYFYYGGPGRNVRCP 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04392 470 Pfam Neprosin 253 463 IPR004314 -
Viun3g04392 470 Pfam Neprosin activation peptide 125 227 IPR025521 -
Viun3g04392 470 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 109 466 - -
Viun3g04392 470 MobiDBLite consensus disorder prediction 153 167 - -
Viun3g04392 470 Gene3D - 247 356 - -
Viun3g04392 470 FunFam Putative carboxyl-terminal proteinase 243 362 - -
Viun3g04392 470 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04392 Viun-Chr3 51757652 51761356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04392 - - gmx:100782442 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04392 3 51757652 51761356 Viun9g01258 9 12233202 12238793 ECH
Viun3g04392 3 51757652 51761356 Viun3g04392 3 51757652 51761356 ECH
Viun3g04392 3 51757652 51761356 Viun9g01258 9 12233202 12238793 PCT