Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01216 ATGGCTGGTTCTGTAGAAAAGGAACAGCAACAAAACCAAGTTGTTGGAATTATCGAAGAAGAGAAATTGCAGAAGCAGGAGAGTAAGAGCAGCATTAAAATCACACGTACGCAAGTGGAGAGCGGCGAAGGGGAAAGAGAGATGACTCCTACGGCTGCCAATTCCATGCACAGGTCGGGTTCGAGGCCTCAACTTGATGTGAGCAAAGCTGAGATTCAAGGGAATGAGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCACCTAGCACTTGACATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACATGAAAACCAATCAGTGGATGATAAAAGAAAAAGTGTAAAAGAGCGACTGGGGTTTTCTAATGGTAACAGGAGAAGCTACCCTATCCTTGGTGGAAGGCTACACTTTGTGAAGTTTGAAACGAGAAAGATTAATGAGTGCTTGGATTTCATTCATTCAAAGCAGCTTCACTGTGGTGGGTTGGAGTCACGTTACTCTGATGGTGTGACTGACCAGAATGGCATAATTAAGGCTACTGGTGGTGGAGCATACAAGTATGCTGATCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGACTGCCTTGTGGCTGGAGCTAACTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCAAAAAGAGTTTGTTCAAATTGAACCCAATGATTTATTCCCTTATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGAGATGGGACATTTGAGAGGATTAGTGGGACAAATGTTGGGGGTGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAAGTATGGACATGCTAGTTGGAGATATATACGGAGGTTTGGACTATTCTAAGATTGGCCTATCAGCTTCCACTATTGCCTCAAGTTTTGGCAAAACAATATCAGAAAAAAAGGAGCTTGAAGAATACAGACCTGAAGATATATCACTTTCTCTTCTAAGGATGATTTCGTACAATATTGGCCAGATAGCTTACTTGAATGCATTGCGATTTCGGTTGAAGAGAATCTTTTTTGGTGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTACATTTCTGGTCAAATGGAGAAGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTTGGAGCTTTAGGTGCATTTATGAGTTATGAGAAGCATGGTTTAGATGACCTCATGGTTCATCAGTTGGTGGAAAGGTTTCCAATGGGTGCTCCGTATACAGGAGGCAAGATTCATGGCCCACCACTTGGAAATTTGAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCGGAAGGGAACTGAGATTACTGCACCTGTGCCAATGAGTCCACTTGGTGGAACTACTGGACTTGGGGGTTTTGAGGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCAAGTGCTCTAAGCGTCGGTGTTCTCCATCTAGTACCAACATTGGAGGTGTTTCCATTACTAGCAGACCCAAAATTGTACGAGCCAAATACAATTGACCTATCAGATAACAATGAACTAGAATATTGGCTCACCATTTTATCAGAGCATTTGTCAGATCTTGTGGACAAGGCAGTAGCAAGTGAAGGTGGAACTGATGATGCCAAGAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCAGCCCACTTGGCAAGGTTGATGGAGGAGCCTTCAGCATATGGGAAGCTAGGCCTCGCCAACCTCTTGGAAATGAGGGAAGAATGCTTGAGGGAGTTCCATTTTGTTGATGCCTACAGAAGTATAAAGCAGAGGGAAAATGAGGCATCACTTGCTGTTTTACCTGACTTGCTGGTGGAACTTGATAGTATGGATGAGGAATCAAGACTGCTTACACTAATTGAAGGTGTTCTGGCGGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAACAAAATGCGTAGACCGTGGCGGGTGGATGATTTTGATGACTTTAAAGAGAGAATGTTAGGGGCCAAAAACAACAAAAATACTCGGCACAAGAGAGCTTTACTTTTTGTAGACAACTCAGGTGCTGACATTGTTCTAGGGATGCTTCCTCTAGCTAGGGAGCTCCTCCGCCGAGGAACTGAAGTAGTGTTGGTTGCAAACTCTCTTCCTGCTTTAAATGATGTAACTGCAATGGAGCTTCCTGACATCATAGCTGAGGCTGCCAAGCATTGTGACATTCTAAGGCATGCTGCTGAAGTTGGAGGCTTGCTTGTGGATGCAATGATTAATACTTCAAACAGCTCTAAAGAAAATTCATCTTCTGTCCCTCTGATGGTTGTCGAGAACGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTTGCTGCTGCCGCAAAAGATGCTGATCTGTTAATTTTGGAAGGGATGGGTAGAGCTCTTCATACTAACCTCGATGCTCGGTTTAAGTGTGATGCTTTAAAGCTTGCGATGGTGAAAAATCAGAGGTTGGCTGAAAAATTGGTTAAAGGGAACATATACGACTGTATTTGCAAATACGAACCTGTTAGTTGA 2745 0.4281 MAGSVEKEQQQNQVVGIIEEEKLQKQESKSSIKITRTQVESGEGEREMTPTAANSMHRSGSRPQLDVSKAEIQGNEEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHENQSVDDKRKSVKERLGFSNGNRRSYPILGGRLHFVKFETRKINECLDFIHSKQLHCGGLESRYSDGVTDQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIEPNDLFPYLLVNIGSGVSMIKVDGDGTFERISGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRSMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGNLNEKISWMEKFLRKGTEITAPVPMSPLGGTTGLGGFEVPLSKGSTLRSDASALSVGVLHLVPTLEVFPLLADPKLYEPNTIDLSDNNELEYWLTILSEHLSDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFHFVDAYRSIKQRENEASLAVLPDLLVELDSMDEESRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDDFKERMLGAKNNKNTRHKRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIIAEAAKHCDILRHAAEVGGLLVDAMINTSNSSKENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLLILEGMGRALHTNLDARFKCDALKLAMVKNQRLAEKLVKGNIYDCICKYEPVS 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01216 914 Gene3D - 314 426 - -
Viun9g01216 914 SUPERFAMILY Actin-like ATPase domain 93 232 IPR043129 -
Viun9g01216 914 Pfam Damage-control phosphatase ARMT1-like domain 621 900 IPR002791 -
Viun9g01216 914 SUPERFAMILY AF1104-like 530 912 IPR036075 -
Viun9g01216 914 Pfam Fumble 94 435 IPR004567 GO:0004594|GO:0005524|GO:0015937
Viun9g01216 914 PIRSF PanK_long 48 914 IPR015844 GO:0004594|GO:0015937
Viun9g01216 914 NCBIfam type II pantothenate kinase 94 436 IPR004567 GO:0004594|GO:0005524|GO:0015937
Viun9g01216 914 FunFam Pantothenate kinase 2 86 245 - -
Viun9g01216 914 MobiDBLite consensus disorder prediction 52 67 - -
Viun9g01216 914 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 715 912 - -
Viun9g01216 914 FunFam Pantothenate kinase 1 94 231 - -
Viun9g01216 914 SUPERFAMILY Actin-like ATPase domain 204 437 IPR043129 -
Viun9g01216 914 FunFam Pantothenate kinase 2 550 636 - -
Viun9g01216 914 Gene3D - 86 245 - -
Viun9g01216 914 MobiDBLite consensus disorder prediction 22 67 - -
Viun9g01216 914 Gene3D - 551 636 IPR035073 -
Viun9g01216 914 FunFam Pantothenate kinase 2 232 417 - -
Viun9g01216 914 PANTHER PANTOTHENATE KINASE 63 803 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01216 Viun-Chr9 11460518 11482977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01216 K24265 - gmx:100781580 1620.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04421 3 51979917 51995285 Viun9g01216 9 11460518 11482977 ECH
Viun9g01216 9 11460518 11482977 Viun9g01216 9 11460518 11482977 ECH
Viun3g04421 3 51979917 51995285 Viun9g01216 9 11460518 11482977 PCT