Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01212 ATGTCTCTGGCTCTTCACACTTTTCCTCATCACTCCCTCAAACTCAGTCTTACTTCTTTTCTACCTTCGTCTATGGAGCAAATTACACTCTCTCAACATGATGATCAAGATTCGGTTTTTTCAGATAGCGAGAGCAGTGTTTCCGGCACGGTAATGGGGTCATCAGAAGACGCTTCTTTCGTCAGACTTCTTCAAGGAGATGTGCTTCATGACCTTATCAAGACACGCTTTATTCGTGGGCTGGGTCTGCTTGGGCCCAAAACGGAGGTTCTTTCCGTTCACCGAAACACGTGTTCTGGCGTCGTTTTGCAGGCACGCCTCCAGTCGTTTCAGCTTCACGCTAGGGCGGTGGCAGAACTGCGTGAAGGGAATGCCAACGTCAAGTACGCTTGGTACGGAACTCGCGGTGAAGATGACGTAAACAACATAGTTTCTCACGGGTTTGCCCACGTCCATGGTCCTCAGCTACTTCTCTCCCCCGATGACGTTCCTCTCCAAATTGTTAGAGAGTGTGTAGTTGGCAAAGACGGTGTGAGGCACGCACTTCTGTGTCGCGTTATTCTAGGGAGATCGGAGCTTGTTGATGATGACACAGAACAATGTTATCCAAGTTCCGAGAAGTATGATTCCGGGGTGGATAGTTTTTCAGCTCCTAGCAAGTACATAATTTGGAGTAATCGCATGAACACTCATGTCTTGCCTGCATATGTTGTAAGCTTCAGGGTTCCTTCTTTCAAAGGGGTTGAGAAGAGTGAAGAAGAACTTTCGAGACCTACTTCGCCTTGGATGCCATTCCCAACTCTGATTTCTGCACTTTCAAAGGTTTTGGCTTCTCGTGATATTGCTCTAATCTCCAAGTTCTACAGAGATAAAAGAGAGAAGAAGATTTCACGACATGAGCTTATACAAAGAGTGAGACAAATAGCAGGGGACAAGTTGCTGTTTGCAGTCATCAAATCTTTCAGAGAAAAGAAGAAACAAAGGTTTCTACAAACAAGGTGA 1002 0.4601 MSLALHTFPHHSLKLSLTSFLPSSMEQITLSQHDDQDSVFSDSESSVSGTVMGSSEDASFVRLLQGDVLHDLIKTRFIRGLGLLGPKTEVLSVHRNTCSGVVLQARLQSFQLHARAVAELREGNANVKYAWYGTRGEDDVNNIVSHGFAHVHGPQLLLSPDDVPLQIVRECVVGKDGVRHALLCRVILGRSELVDDDTEQCYPSSEKYDSGVDSFSAPSKYIIWSNRMNTHVLPAYVVSFRVPSFKGVEKSEEELSRPTSPWMPFPTLISALSKVLASRDIALISKFYRDKREKKISRHELIQRVRQIAGDKLLFAVIKSFREKKKQRFLQTR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01212 333 Gene3D - 59 242 - -
Viun9g01212 333 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 30 324 IPR044964 -
Viun9g01212 333 Pfam RCD1-SRO-TAF4 (RST) plant domain 257 322 IPR022003 -
Viun9g01212 333 ProSiteProfiles RST domain profile. 256 327 IPR022003 -
Viun9g01212 333 ProSiteProfiles PARP catalytic domain profile. 45 266 IPR012317 GO:0003950
Viun9g01212 333 SUPERFAMILY ADP-ribosylation 91 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01212 Viun-Chr9 11333707 11336151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01212 - - pvu:PHAVU_009G178500g 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01212 9 11333707 11336151 Viun9g01212 9 11333707 11336151 ECH
Viun3g04423 3 52010633 52014436 Viun9g01212 9 11333707 11336151 PCT