Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04423 ATGGACCGACCAATTCACCATTCATCGGACACGCGTACTTATGTTTCGGATGAAGAATCAGTGGTTTCTGATTGCGAGAGCGGGGTTTCCGGTGACGAGGGGACGTTTTCGGGAGCCTTTGTGCCGGCGGCGGAAGACGGCCGTCACGTCCGGACTAGATTCGTCCGGAGCTTGGCCCTTAACGGGTTGAGGCCCGAGGTGTTGACGATTGCCAAGAACGCGCATTCCTCCGTCTTGGCGCGTGCGCGTGCTCAGTGCTTTCAGATTTCTGCTCGTGCGGTGGCGGAATTGCACGGCGGTCATGCTAACGTGAGGTTCGCTTGGTATGGTGCGTCCGGTAAGGAAGAGATAGCTGATATCGCCCAACATGGTTTCGGCCACGCGCACTGTAACGGCCTGCGTCTCTCTCCGCTGGATTGCCCACTCCAAAGTGTGAAGAGATCCGGTGTAGACAGTGACGGCGTGAGGTACTTGTTGCTGTGTAGCGTTATCTTGGGGAAGACGGAGGTGGTACCACATGGCTCGAATCAACGCCGTTCGAGTTCTGAAGAGTACGATTCTGGGGTGGACGATCTTTTGGCTCCCAAGGAGTATGTTATTTGGTGTAACCGGATCAACACTCATGTTTTGCCCGAATATGTTTTGAGTTTCACGCTTCCTTCCTTGAAAGGGAATGTGAATATTGGGGAACCTTTAAGGCCCTCTTCGCCATGGATGCCATTCCCAGCTTTGGTTTCGGTGCTTTCGAGGATTTTGCCTGCGGATCAAGTTGCCATCATTGTCAAGATACGCAAAGATTATACAGAATTGAAAATTTCTCGACATGAGATGATACAGAGAGTGAGAAATATAGCAGGTGACAAATTGCTAGTTTCCATCATCAGATCTTTCAGAGCCAAGAAAACACCTGCAAGCTCTAAAGCAAACAAGGGGAAACAAGGGCCAGGGGAAAGAAGAGCAAGGGGACAGCCAGTAGCATGA 981 0.5148 MDRPIHHSSDTRTYVSDEESVVSDCESGVSGDEGTFSGAFVPAAEDGRHVRTRFVRSLALNGLRPEVLTIAKNAHSSVLARARAQCFQISARAVAELHGGHANVRFAWYGASGKEEIADIAQHGFGHAHCNGLRLSPLDCPLQSVKRSGVDSDGVRYLLLCSVILGKTEVVPHGSNQRRSSSEEYDSGVDDLLAPKEYVIWCNRINTHVLPEYVLSFTLPSLKGNVNIGEPLRPSSPWMPFPALVSVLSRILPADQVAIIVKIRKDYTELKISRHEMIQRVRNIAGDKLLVSIIRSFRAKKTPASSKANKGKQGPGERRARGQPVA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04423 326 ProSiteProfiles PARP catalytic domain profile. 24 238 IPR012317 GO:0003950
Viun3g04423 326 ProSiteProfiles RST domain profile. 232 303 IPR022003 -
Viun3g04423 326 MobiDBLite consensus disorder prediction 1 29 - -
Viun3g04423 326 MobiDBLite consensus disorder prediction 299 326 - -
Viun3g04423 326 SUPERFAMILY ADP-ribosylation 98 218 - -
Viun3g04423 326 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 45 299 IPR044964 -
Viun3g04423 326 Pfam RCD1-SRO-TAF4 (RST) plant domain 233 298 IPR022003 -
Viun3g04423 326 Gene3D - 42 218 - -
Viun3g04423 326 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04423 Viun-Chr3 52010633 52014436 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04423 - - gmx:100784311 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04423 3 52010633 52014436 Viun9g01212 9 11333707 11336151 PCT