Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01207 ATGAAGAAAATATCAACCAAGAAATCTTCTACATGGGGACATGTAGTTACACCTGCAGCTCATTATCAATCTCGTCTAGGTGGTGAAATTGCACAACCGGAAAATGTTGATCAGCAGAATAGTGGAGAGGAGCTTGGTAAACAAAGTTCAGACACATCTGTGTTTGTTAATTCAGAACCAATGCGCGAGGAACAAATTCAAAATGCTGTGAAATTTCTGTCGCACCCGAAAGTTAGAGGTTCTCCTGTCATCCATAGGCGGTCATTTCTGGAGAAGAAGGGCCTTACGAAGGAGGAGATTGATGAAGCCTTTCGGCGTGTGCCTGATTCAGCTCCCAGTGTGCAGACAGCTGGTGTAAATCAAGATGAACAATTAAAGCCATCTTCAAACATTCATCAGCAAAGCCAACCACAGGCTTTGCAGACGACTGTACCAGCTTCTACTGGCGTTATTACTTCATTGGGAACCTTGTCACACCACCATTTTCACTGGTCTCATGCCCTTATTGCAGTTGGATTACTAGCTACTTCTGGTGCTGGTACAGTTATACTAATTAAGAATTCTGTTCTCCCTTGGTTAAAATCCTGGTTGCGCAATGTTGTGCTAGAAGGGGAAAATGACCAATTAAAGAGAACAGGCTCAAAACCAACATTGGCAGAAGAAGCTGCACAGGCGGCAAAAGCAGCTGCAGTTGCAGCTGCTGATATGGCAAAAGCTAGCCAAGAATTACTGGCTTCTAAAATTGAAGAAAAGAGATATTTTGTACAAGTAGTGAGCCTTTTGGATAGGCAAGTGGAGGAAATGAAGTTGATGACCATTGCAATAAAAAGATTGGAAGCTTCTGGTGGACTCTCTGTCTCCAAGCAAGAAGATCGCCAAGTCACTCAAACAAGTTCAAAGATACAGCAACCTATCCTTAATGGGAAGTCAGACTACGAGTCCCAATCAGTGAGATCTTCATCCCCTCCTGTATCTGTTCAACCATCTAGTGCTCCGCATCCAAAATCATATTTGGAGATAATGGCCATGCTCCAAAGAGGAGAGAAGCCTTCTAATATTAGAGAAATTGATGATTCTCCCCCCAACCCTTATCAGCAACCATCAAACCCTCGCTTAGCACCTAGAGCCAAGCCTTGGGAGGTTAGTCAGGTGCAAAACACCTCAACCCAAGTCCTCCAGTATCAAGCAAATGGCAGGGTCCAAGATAGTGGTGGTGACAACTCAGTACCCTGGTGGCAAACAAAGAACATCAGAATCAAAGAGATTGATAACGAAGTTGAGTATAATGTAGCATCTGTCGCATCCAGTCAGCAGCCACTCCAACGAATGTGGGTTCCTCCTCAACCTCCTCCCATAGCAATGCCGGAGGCTGCCGAAGCGATCAGACGCCCAAAATCAGTCCTACAAAAGGAAGCAATTCAGGATGATCATTCAGCACCAAGTTTTTCAGAGTTCTCTAATGGATCCAATTCCGAATATGCAATAGAAGGCAACGGCATCAACTCACTTGTCAGCTCTGGTGAGATCCAAAATCATGAACTCAATTACGAAGAAAAATAA 1560 0.441 MKKISTKKSSTWGHVVTPAAHYQSRLGGEIAQPENVDQQNSGEELGKQSSDTSVFVNSEPMREEQIQNAVKFLSHPKVRGSPVIHRRSFLEKKGLTKEEIDEAFRRVPDSAPSVQTAGVNQDEQLKPSSNIHQQSQPQALQTTVPASTGVITSLGTLSHHHFHWSHALIAVGLLATSGAGTVILIKNSVLPWLKSWLRNVVLEGENDQLKRTGSKPTLAEEAAQAAKAAAVAAADMAKASQELLASKIEEKRYFVQVVSLLDRQVEEMKLMTIAIKRLEASGGLSVSKQEDRQVTQTSSKIQQPILNGKSDYESQSVRSSSPPVSVQPSSAPHPKSYLEIMAMLQRGEKPSNIREIDDSPPNPYQQPSNPRLAPRAKPWEVSQVQNTSTQVLQYQANGRVQDSGGDNSVPWWQTKNIRIKEIDNEVEYNVASVASSQQPLQRMWVPPQPPPIAMPEAAEAIRRPKSVLQKEAIQDDHSAPSFSEFSNGSNSEYAIEGNGINSLVSSGEIQNHELNYEEK 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01207 519 Pfam Family of unknown function (DUF5572) 332 381 - -
Viun9g01207 519 Gene3D - 54 116 IPR036388 -
Viun9g01207 519 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 32 479 IPR025655 GO:0005515|GO:0005778|GO:0016560
Viun9g01207 519 MobiDBLite consensus disorder prediction 23 53 - -
Viun9g01207 519 MobiDBLite consensus disorder prediction 286 332 - -
Viun9g01207 519 MobiDBLite consensus disorder prediction 33 53 - -
Viun9g01207 519 Coils Coil 261 281 - -
Viun9g01207 519 FunFam Peroxisomal membrane protein PEX14 54 116 - -
Viun9g01207 519 Pfam Pex14 N-terminal domain 62 106 IPR006785 -
Viun9g01207 519 MobiDBLite consensus disorder prediction 284 333 - -
Viun9g01207 519 MobiDBLite consensus disorder prediction 351 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01207 Viun-Chr9 11286584 11301641 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01207 K13343 - gmx:100807229 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04427 3 52047419 52056701 Viun9g01207 9 11286584 11301641 PCT