Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01133 ATGGCTCACGCCACAAAGCAAACGCAGAACACAAAGCAGAGGGTCCTCACGTGCTTGACGAAGCTCTCGGACCGCGACACACAGGCTGCAGGAGCCACCGAACTCGAGTCCATCGCTCGTAGCCTAGACCCGCACTCTGTTCCCGTGTTCCTCTCCTGCATTCACTCCACCGACGCCTCCGACAAAACCCCTGTCCGCAAACAATGCGTGCACATCGTTGCCACGCTCTCCCACGCGCACGGCGACGCGCTCTCGCCCTTTCTCTCCAGAATCCTAGCCAACCTCGTGCGCCGCCTCCGCGACCCTGACTCCTCCGTGCGCGCCGCCTGCGCGGACTCTGTCGGCGCGCTGTCGGCGCGTGTCACTCGGCAGCCGTTCTCCTCCTTCCTCAAGCCGCTGGCGGAGGCGCTCTTCACAGAGCAGGACCCCAACTCGCAGGCCGCCGCCGCGCTCTGTCTCGCCTCCGCCATCGACGGGGCTCCGGATCCAGACCCCGCCAGGCTTGCCAGGCTGCTCCCGAGGTTTGAGAAGCTCCTCAAGAGTAAGGTGTTCAGGGCCAAGCCCGCGCTGCTGGCGCTCGTCGGAAGTGTCGCGGAGGCCGGCGGGGCGTCGAGTCGCGGCGCGTTGAGGAATTTGGTTCCCTGCCTTGTGGAGGCGCTCGGCAGCGTGGACTGGGCCACGAGGAAGGGCGCGGCGGAGGCGTTGAGGAGACTCGCCGTCGCGGAGAGGGACCTCTTGTCAGAGTTCAAGGGTGAATGTTTCAGAGTGCTCGAGGATCGGCGATTTGATAAGGTAAAGTTGGTTCGGGAAGTTGTGAATCAGATGTTGGAGGCGTGGAAGCAGATTCCTGATGTTTCCGATGAGTTTTCTCCACCTCCTCACTCCCAGTCTTCTTTAAAAGAGAATGCAAGTGATGGGCGCTATCCTCCTGTCTCTCAAAATTCATGTAGTCCGGGTTCTGTTATGAGTAAATTGAGGAAGAAATCAAGCCCAATTAGCAAATCAACTCCACCGGATAGATCTCTTGCCAGAAATGCTAAAAAGTTGAGTGCCTTAAGTGGTGACCGGATGAATTCGGGTGTTTTGCAGAAACTGAACCATGACCATTGGGATGTTAGAATTGCTGTGTCAAATGTTCCTGATCGTGGTGAATGTCAGCCGAGGGATGAAAATGTATTGGAAAGCAGCAAGAAGGATAAAAGCAGATTTTTCAAGTCAGACACAAAACGGTCTCTATTTGAGAAAAATTCTGATGACAAGATGCATAAATTTGGTGGGTCGAAAGCTGGATCTCGCGTGGTTCCTTGTTCAGAAGAGAATCAAGACTCAGGTCCTGTCTGTAATGTACCAAAGGATGTTCCTAGGAATGAGAAAGAGAGTGAGGAATTATCGTTGATTCGTGCCCAGTTAGTTCAAATTGAGAAGCAGCAGTCAAGTCTGTTTGATCTTCTACAGAAATTCATAGGGAGCTCTGAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGCCTCGAGTTGGCATTGGATGATATATCTTATGATTTGGCTGTAACTAGTGGAAGGATGACTAAATCTGATGCTCCCAAGAATACATGCTGTCTGCTACCCGGTGCCGAATTTTTAAGCTCCAAATTCTGGAAGAAAACACAGATCAGGTATTCATCCAACCGGTTCTCTAGAACTGGTAGCACTCCATTACTAGCTTCCAATCATTACAGAGCTAACAGGAACACCGAATCTAGTACGGCAAGCCACAGGTTTAGGGTCCGTGGTGATGGAAGCTTCATCACAAATCCTCTGGCCGAGATTAAAATTAATTCAAGGGAAATTTCGGGCTCTGCAAGATCACAGCTAGCTTGA 1863 0.5255 MAHATKQTQNTKQRVLTCLTKLSDRDTQAAGATELESIARSLDPHSVPVFLSCIHSTDASDKTPVRKQCVHIVATLSHAHGDALSPFLSRILANLVRRLRDPDSSVRAACADSVGALSARVTRQPFSSFLKPLAEALFTEQDPNSQAAAALCLASAIDGAPDPDPARLARLLPRFEKLLKSKVFRAKPALLALVGSVAEAGGASSRGALRNLVPCLVEALGSVDWATRKGAAEALRRLAVAERDLLSEFKGECFRVLEDRRFDKVKLVREVVNQMLEAWKQIPDVSDEFSPPPHSQSSLKENASDGRYPPVSQNSCSPGSVMSKLRKKSSPISKSTPPDRSLARNAKKLSALSGDRMNSGVLQKLNHDHWDVRIAVSNVPDRGECQPRDENVLESSKKDKSRFFKSDTKRSLFEKNSDDKMHKFGGSKAGSRVVPCSEENQDSGPVCNVPKDVPRNEKESEELSLIRAQLVQIEKQQSSLFDLLQKFIGSSENGMRSLETRVHGLELALDDISYDLAVTSGRMTKSDAPKNTCCLLPGAEFLSSKFWKKTQIRYSSNRFSRTGSTPLLASNHYRANRNTESSTASHRFRVRGDGSFITNPLAEIKINSREISGSARSQLA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01133 620 Gene3D - 4 379 IPR011989 -
Viun9g01133 620 MobiDBLite consensus disorder prediction 423 454 - -
Viun9g01133 620 FunFam TORTIFOLIA1-like protein 3 isoform A 2 359 - -
Viun9g01133 620 Pfam HEAT repeat 92 118 IPR000357 GO:0005515
Viun9g01133 620 SUPERFAMILY ARM repeat 11 375 IPR016024 -
Viun9g01133 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 576 IPR033337 GO:0005874|GO:0008017
Viun9g01133 620 Coils Coil 456 476 - -
Viun9g01133 620 MobiDBLite consensus disorder prediction 290 340 - -
Viun9g01133 620 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
Viun9g01133 620 MobiDBLite consensus disorder prediction 284 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01133 Viun-Chr9 9536319 9540380 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01133 - - gmx:100778310 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01133 9 9536319 9540380 Viun9g01133 9 9536319 9540380 ECH
Viun3g04487 3 52601313 52604883 Viun9g01133 9 9536319 9540380 PCT