Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04487 ATGTCGTCGTCACCGCAGAGCGTAAAGCAAAGAGTCTTCGCATGCCTGACCAAACTCTCTGACCGCGACACGCAGTCTCTCGCCACTGCAGAACTCGAGTCCATCGCTCGGTGTCTCGATGCGGCCACCGTGCCGGCTTTCCTATCGTGCATGTACTCCACTGACCCGTCCGACAAGCCACCGGTCCGCAAGCAATGTGTGCAGCTGCTAGGGTTCCTGGCCGAGACGCATGGCAACATGCTCGCGCCGTACCTGTCTAAAATTATCGGCAGTGTTGTGCGGCGCCTCCGCGACGCGGACTCGTCGGTGCGATCCGCGTGCGTGAGTTCGGTTGCGGCATTGTCGCGGCACGTCAACAGGCAGCCGTTGCATTCGTTCGTGAAGCCGTTGGCGGAGGCGCTGTTCACGGAGCAGGACCAGAACGCGCAGGTTGGAGCCGCGCTGTGTCTCGCCGCCGCGATCGATGGAGCTCCGGATCCGGACCCGGCCAGGCTGGCGAAGCTACTGCCGCGGTTTGAAAAGCTTCTGAAGCGCGACGGGTTCAAGGCGAAGCCCGGGCTGTTGACGCTAGTGGGAAGCGTCGTCGCTTCCGGCGGCGCGTCCGGTCACGCGCCCTTGAAGAGTTTGGTTCCGTGCCTGGTAGAAGCGTTGGGCAGCGACGATTGGGCCACGCGGAAGGCTGCGGCGGAGACTCTCGTGGTGGTTGCCAACGTAGAGAGGGATTTCTTGTCGGAGTTCAAGGCCGACTGTGTGAGAGTTTTTGAAAATCGACGGTTTGATAAGGTAAAGTTAGTTCGGGAAGTTATGAATCAGATGTTGGAAGCGTGGAAGCAGATTCCTGATGTTTCCGATGAAGTTACGCCACCTCCTAAATCGCAACCTTCTTCTAAAGAGAATTCAAGTGATGGACGCTATCCTGCTGTCTCTCAAAATTCATGTAGTCCTCGTTCAGTGATGGCCAATCTGCGGAAGAAAACTACACCTTTTAGCAGATTCAGTCCAGCAGATAGTTCTTCTCCTAGCAGTGCCAAGAATAGGAGTGCTTCAAGTGGCAACAACAAGAGAACGAGTTCGATTGTTTCCCGAAAACTAAATAATAAGAATTGGGATACTCAAGTTGCTGTGGTTGATCAGGGAGATCTGCAGGAGATGGATGGAATTGTTTTGGAAAGTAACAAAATGGATAAAAGCAGATTTTCAAAGCCAGAAATGAAAAGGGCACTGCTATATAGAGGTTCTGATGATAGAATACACAAGTATGGTGGGTCCAAAGCTGGATCTCGAGTGGTTCCATATCATGAAGAAAGTCAAGACTCGGTTCCTGTCAGTGATGTCTCTAAAGATCTCCATAGGAATGACAAAGAGAGTGAAGATTTATCGCTGATCCGTGATCAGCTACATCAGATTGAGAAGCAGCAGTCAAGTCTACTCGATCTTCTGCAGAAATTTATGGGGAGCTCACAAAATGGAATGCGTTCTTTAGAGACTCGTGTGCATGGTCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTATATCAAGTGGAAGGATGACTAAATCTGATGTTCATGGCAACACATGTTGCATGCTACCTGGAGCAGAATTTTTGAGCTCTAAATTTTGGAGGAAAACACATGACCGGCATTCAATCCCGCGGTTCTCTAGATCAGGTGGCATCACTTCATCACTTGCTGCCTCGAACTACCAAGCCGACAAGAATGGTGAAACCAAGTTGACAAACCATAGATTTAGGCTTGATGGAGGCTTCATCACTAATCCACTGGCAGAGATTCATGCAGATTCGAGAAATTTTGCTACATCAGAGCTGGTTTAA 1839 0.5068 MSSSPQSVKQRVFACLTKLSDRDTQSLATAELESIARCLDAATVPAFLSCMYSTDPSDKPPVRKQCVQLLGFLAETHGNMLAPYLSKIIGSVVRRLRDADSSVRSACVSSVAALSRHVNRQPLHSFVKPLAEALFTEQDQNAQVGAALCLAAAIDGAPDPDPARLAKLLPRFEKLLKRDGFKAKPGLLTLVGSVVASGGASGHAPLKSLVPCLVEALGSDDWATRKAAAETLVVVANVERDFLSEFKADCVRVFENRRFDKVKLVREVMNQMLEAWKQIPDVSDEVTPPPKSQPSSKENSSDGRYPAVSQNSCSPRSVMANLRKKTTPFSRFSPADSSSPSSAKNRSASSGNNKRTSSIVSRKLNNKNWDTQVAVVDQGDLQEMDGIVLESNKMDKSRFSKPEMKRALLYRGSDDRIHKYGGSKAGSRVVPYHEESQDSVPVSDVSKDLHRNDKESEDLSLIRDQLHQIEKQQSSLLDLLQKFMGSSQNGMRSLETRVHGLELALDEISYDLAISSGRMTKSDVHGNTCCMLPGAEFLSSKFWRKTHDRHSIPRFSRSGGITSSLAASNYQADKNGETKLTNHRFRLDGGFITNPLAEIHADSRNFATSELV 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04487 612 Pfam HEAT repeat 209 236 IPR000357 GO:0005515
Viun3g04487 612 MobiDBLite consensus disorder prediction 280 363 - -
Viun3g04487 612 Coils Coil 452 472 - -
Viun3g04487 612 Gene3D - 2 377 IPR011989 -
Viun3g04487 612 MobiDBLite consensus disorder prediction 432 451 - -
Viun3g04487 612 SUPERFAMILY ARM repeat 2 486 IPR016024 -
Viun3g04487 612 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 581 IPR033337 GO:0005874|GO:0008017
Viun3g04487 612 FunFam TORTIFOLIA1-like protein 3 isoform A 1 358 - -
Viun3g04487 612 MobiDBLite consensus disorder prediction 288 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04487 Viun-Chr3 52601313 52604883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04487 - - gmx:100789197 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04487 3 52601313 52604883 Viun9g01133 9 9536319 9540380 PCT