Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01124 ATGAAGCGAAACCTTCAAACGTTGTTTATGTTAACACGAAAACGATCGATTCAGTTTCTAATCGGTGCGTTTTTCTTGTACCTCGTACTCGTAACACTCGAAATCCCTCTCGTTTTCAAAACCGACTTCACCACCGTCGCCACGCGCACTCCCAAGCTCCTCAGCGAAGAAGACTCGCTACTGAAGGAGTCCCCGGCGCGGCCTTTGAAAACGGTTTCCAACGCTGACTCGCCGAGTCAACTCGCTCGCCGCAGCGTGGTTTCCGGGTTGGTCCTGAACGACGCCGTGTTCGAATCCAACGCCAACGACGGGTCGTTGGAGCTCTACAAGCTCGTAAAGCGTGCGCGCCAGATGGGACGGAGGCTTTGGACGGACCTTGAATCTGGAAAGTTGCGGACCGTTGTGTCGAAGCCCGAGAACCGGTCCAGTTCGTGTCCCGGTTCGGTTTCTCTGTCAGGTAAGGATGCATTGGGCGTCGTGCCACTGCCGTGTGGGCTCACATTGGGGTCACACGTGACGATCGTTGGGAAGCCGTTGGCGGCGCGGCCGGATTTCGAGCCGAATATAGCGGTTGTGACGGAGAATGAACCGGTGATGGTGTCACAGTTCGTGGTGGAGTTGCAGGGGCTGAAGACGGTGGACGGTGAAGAGCCTCCTAGGGTTTTTCACTTCAATCCGAGGTTGAAGGGAGATTGGAGTGGGAAGCCTGTGATTGAACTCAACACGTGTTATCGCATGCAATGGGGTTCCGCTCTCAGGTGCGACGGTTGGAAATCCAAGGCCGATGATGATACCGTTGATAGGATGGTGAAGTGCGAGAAGTGGATTAGGGATGATGAACAGCACTTAGAGGAGTCTAAGTCGACGTGGTGGTTGAAAAGACTTATAGGGCGCACCAAGAAAGTAAACGTTGACTGGCCATTCCCGTTCTCTGAGGGGAAGCTTTTTGTTCTTACAATTAGTGCTGGGCTGGAGGGGTATCATGTTACTGTTGATGGGAGACATGTAGCATCTTTTCCTTATCGCGCTGGTTTTACTCTTGAGGATGCCACTGGGCTTTCGTTGGCCGGAGACATTGATGTTCACTCTGTATTTGCAGCGTCTTTGCCTTCATCGCATCCCAGTTTTTCCCCACAGAGGCATCTCGAATTTTCCACCAGGTGGCGTGCCCAGCCACTTCCTGACTCTGGCGTAGAATTGTTCGTTGGTGTTCTCTCAGCTGGAAACCATTTTTCTGAGAGGATGGCTGTGAGGAAGTCATGGATGCAGCATAGGCTTGTCAAATCTGGAGCAGTGGTTGCTCGATTCTTTGTTGCACTGCATGCAAGACAGGAAATTAATGTAGAGTTGAAGAAGGAAGCAGACTTTTTTGGTGATATTGTTATAGTGCCTTACTTAGATAACTATGATCTTGTTGTCTTGAAAACAGTGGCTATATGTGAATATGGGGTTCATACGGTTTCTGCCAAGTATATCATGAAAGGGGATGATGATACTTTTGTTAGAGTGGATGCCGTTATCAGTGAAGCAAGGAAGGTTCCAGATGATACCAGTTTTTATATCGGTAACATAAATTACTATCATAAACCCTTGCGATATGGGAAATGGGCAGTGACATATGAAGAATGGCCAGAAGAGGATTACCCACCCTATGCTAATGGCCCGGGATATATTTTGTCATCAGATATTGCACGATATATTGTATCTGAATTTGAAATGCATAAATTAAGGTTGTTTAAGATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCAATTTAACCGGTCAAAAGCTGTACACTATTCTCATAGCTTGAACTTCTGCCAATTTGGTTGCATAGAAGACTATTACACCGCCCATTACCAATCACCTAGGCAGATGATGTGTCTGTGGGATAAACTGCAAAGGCAGACAAGGCCTCAGTGCTGTGACGTGAGATGA 1941 0.4848 MKRNLQTLFMLTRKRSIQFLIGAFFLYLVLVTLEIPLVFKTDFTTVATRTPKLLSEEDSLLKESPARPLKTVSNADSPSQLARRSVVSGLVLNDAVFESNANDGSLELYKLVKRARQMGRRLWTDLESGKLRTVVSKPENRSSSCPGSVSLSGKDALGVVPLPCGLTLGSHVTIVGKPLAARPDFEPNIAVVTENEPVMVSQFVVELQGLKTVDGEEPPRVFHFNPRLKGDWSGKPVIELNTCYRMQWGSALRCDGWKSKADDDTVDRMVKCEKWIRDDEQHLEESKSTWWLKRLIGRTKKVNVDWPFPFSEGKLFVLTISAGLEGYHVTVDGRHVASFPYRAGFTLEDATGLSLAGDIDVHSVFAASLPSSHPSFSPQRHLEFSTRWRAQPLPDSGVELFVGVLSAGNHFSERMAVRKSWMQHRLVKSGAVVARFFVALHARQEINVELKKEADFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTVSAKYIMKGDDDTFVRVDAVISEARKVPDDTSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARYIVSEFEMHKLRLFKMEDVSMGMWVEQFNRSKAVHYSHSLNFCQFGCIEDYYTAHYQSPRQMMCLWDKLQRQTRPQCCDVR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01124 646 Gene3D - 158 274 - -
Viun9g01124 646 Gene3D - 288 368 - -
Viun9g01124 646 Pfam Galactoside-binding lectin 160 365 IPR001079 GO:0030246
Viun9g01124 646 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 381 594 IPR002659 GO:0006486|GO:0016020|GO:0016758
Viun9g01124 646 SMART Gal_bind_lectin_2 162 366 IPR001079 GO:0030246
Viun9g01124 646 Gene3D - 394 643 - -
Viun9g01124 646 FunFam Hydroxyproline O-galactosyltransferase 391 634 - -
Viun9g01124 646 Pfam Galactosyltransferase 413 593 IPR002659 GO:0006486|GO:0016020|GO:0016758
Viun9g01124 646 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 158 367 IPR001079 GO:0030246
Viun9g01124 646 SMART galectin_3 159 367 IPR001079 GO:0030246
Viun9g01124 646 FunFam Hydroxyproline O-galactosyltransferase GALT4 157 274 - -
Viun9g01124 646 CDD GLECT 159 365 IPR001079 GO:0030246
Viun9g01124 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 160 365 IPR013320 -
Viun9g01124 646 FunFam Hydroxyproline O-galactosyltransferase GALT2 281 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01124 Viun-Chr9 9406787 9410298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01124 11 646 Glycosyltransferase AT1G74800 63.182 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01124 K20843 - gmx:100816777 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01124 9 9406787 9410298 Viun9g01124 9 9406787 9410298 ECH
Viun3g04510 3 52866924 52872446 Viun9g01124 9 9406787 9410298 PCT