Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00887 ATGGGGACGACGAAGAGCAGCTCCAATTCTACCTCAATATCTGATCTTAATAATAATGAAAATAATAATAGTAGTAATAATAATAATAATAATGTCAATGTTAATGGCGACAAAGACAGAAACAACACGACCAGAGTGGTGTTGAATGTCTACGACCTCACCCCTCTCAACAATTATTTGTATTGGTTTGGCTTTGGAATCTTTCATTCTGGCATTGAAGTACACGGTAAAGAGTATGGATTTGGAGCTCATGACTTTCCAGCAAGTGGAGTATTTGAAGTAGAGCCAAAGAAGTGCCCTGGATTTATATACAGATGTTCTGTGAATTTAGGGCAAATAAACATGCATCCTTCTGAGTTTCGAATTCTCATTGAGAGTATAGCTAATGAGTATCATGGAGATACTTACAACCTCATATCTAAGAACTGCAATCATTTTACGGATGATGTTTCAAGTAGATTGAATGGAAAACGAATCCCAGGTTGGGTCAATCGTCTTGCTAGACTAGGTTCACTATGCAGTTGCCTACTTCCTGAGTGTGTTGAAGTAACTACTGTTAAACAACTACCGGAATACCATGACTGTTCAGAAGATGAAATCACTGATTCTCTTTCGTCTGCATCACCATGTGCATCTCAAACAACATCAGTAATAGACGATGATCAAGAAAAGCACCTTCTGTCACCTTTTGCAAGCAAAGCAGAAAATGTTTCGTTTGTTAAAGAGGCACCATTAAAATGA 741 0.3779 MGTTKSSSNSTSISDLNNNENNNSSNNNNNNVNVNGDKDRNNTTRVVLNVYDLTPLNNYLYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPKKCPGFIYRCSVNLGQINMHPSEFRILIESIANEYHGDTYNLISKNCNHFTDDVSSRLNGKRIPGWVNRLARLGSLCSCLLPECVEVTTVKQLPEYHDCSEDEITDSLSSASPCASQTTSVIDDDQEKHLLSPFASKAENVSFVKEAPLK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00887 246 Gene3D PPPDE domains 38 196 IPR042266 -
Viun9g00887 246 ProSiteProfiles PPPDE domain profile. 44 181 IPR008580 GO:0008233
Viun9g00887 246 SMART DUF862_2a 44 186 IPR008580 GO:0008233
Viun9g00887 246 Pfam PPPDE putative peptidase domain 45 178 IPR008580 GO:0008233
Viun9g00887 246 PANTHER DESUMOYLATING ISOPEPTIDASE 43 225 IPR008580 GO:0008233
Viun9g00887 246 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00887 Viun-Chr9 6751611 6754200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00887 K22763 - gmx:100810582 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00887 9 6751611 6754200 Viun9g00887 9 6751611 6754200 ECH
Viun3g04810 3 55435858 55440298 Viun9g00887 9 6751611 6754200 PCT