Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04810 ATGGGTGTGGAGAATGCCTCGAAGTCCATTTCCACCTCACAATGCGATGACCAACTTAGCAACAGCAAAATCAACACACTCGTGCGTTTGAATGTCTACGATCTCACCCCTGTCAATAATTACGTCTACTGGTTTGGATTTGGCATATTTCATTCTGGCATTGAAGTGCATGGTAAGGAGTATGGATTTGGAGCCCATGATTTCCCAGCAAGTGGAGTTTTTGAAGTGGAGCCAAGGAAGTGCCCTGGATTCATATATAGATGTTCCATCACTTTGGGTCAAACTAATATGAGTGCTTCTGAGTTTCGTACATTTATTGAAAACATGGCTGCTGAGTATCATGGAGATACCTATCACCTTATAACTAAGAACTGCAATCATTTTACAGAGGATCTCTCCAATAGATTGACTGGGAAACAAATCCCAGGTTGGGTGAATCGGCTTGCAAAGCTAGGTGCTTTATGCAGTTGTCTACTTCCTGAAAGTCTCCAAGTAACAAGTGTTAAACAGCTACCTGAATACCATGAATGCTCAGAAGATGAATTTGTTGAATCTCTTTCACCTGCCACACCCCGCGAGTCAACAGAAATAGATGAGGAGCAAGAAAAGCACCTTCTTTCATCATCAACTGTAACTGAGGATGTTACTTTCGTTAGAGAAAGCCAAGCAAAATAA 675 0.4178 MGVENASKSISTSQCDDQLSNSKINTLVRLNVYDLTPVNNYVYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPRKCPGFIYRCSITLGQTNMSASEFRTFIENMAAEYHGDTYHLITKNCNHFTEDLSNRLTGKQIPGWVNRLAKLGALCSCLLPESLQVTSVKQLPEYHECSEDEFVESLSPATPRESTEIDEEQEKHLLSSSTVTEDVTFVRESQAK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04810 224 PANTHER DESUMOYLATING ISOPEPTIDASE 26 204 IPR008580 GO:0008233
Viun3g04810 224 Gene3D PPPDE domains 21 178 IPR042266 -
Viun3g04810 224 SMART DUF862_2a 26 164 IPR008580 GO:0008233
Viun3g04810 224 Pfam PPPDE putative peptidase domain 28 160 IPR008580 GO:0008233
Viun3g04810 224 MobiDBLite consensus disorder prediction 193 207 - -
Viun3g04810 224 ProSiteProfiles PPPDE domain profile. 26 163 IPR008580 GO:0008233
Viun3g04810 224 MobiDBLite consensus disorder prediction 182 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04810 Viun-Chr3 55435858 55440298 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04810 - K22763 gmx:100778961 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04810 3 55435858 55440298 Viun3g04810 3 55435858 55440298 ECH
Viun3g04810 3 55435858 55440298 Viun9g00887 9 6751611 6754200 PCT