Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00826 ATGAGGTGGGAAAAGGTAAAGGGAACAGGAGGAGAAGGACCAGGGAGGAGGTGGGGCCACACGTGTAACGCTGTTAGAGATGGCAGACTTCTTTATCTCTTCGGTGGTTACGGCAAATTTAACTGTCAGACCAACCAAGTTCACGTATTCGACACTCTGAGACAGAGTTGGAGTGAACCAGCAGTTAAAGGGACCCCACCTACTCCTAGGGACAGCCATAGTTGCTCGGTTGTTGGTGATAGTCTTTTTGTGTTTGGGGGTACAGATGGGACCAGGCTGCTGAATGATTTGCATATTCTAGACACTTCTTCACATACATGGATTTTTCCAACTGTGAGAGGGGAAGCACCAGAGGCACGGGAGGGTCATGCTGCTGCAGTTATTGGCAAACGACTGTATGTGTTTGGTGGTTGTGGGAGATCTGCAAATAATACTAATGATGTGTACTACAATGACCTTTACATATTAAATACAGAAACATATACATGGCACCGTGCTACAACATCAGGCACTCCACCATCTCCTAGAGATAGCCACACTTGCTCATCTTGGAAAAACAAAATTATTGTGATCGGTGGTGAAGATGAACAAGATTATTATCTGTCTGATGTTCATGTCCTAGATACTGATACTCTTACCTGGAGCAAAATGTGTATGTCTAGCCAACCATTGCCACCTCGAGCTGGTCATTGTACAGTTTCTTTGGGCAACAGCTTGTTTGTTTTTGGGGGCTTTACAGAAGCTCAATGCCTATACAACGACCTGCATATGCTTGATATTGAGACTGGTGTGTGGACGAAGGTGGCAACTACACCTACTGGTCCTTCTGCTAGATTTTCTGTAGCTGGTGACTGTTTAGATCCACATGTGGGTGGTGTTCTTCTGTTTTTGGGAGGTTGTAATAGAAGTCTGGAGGCCCTGGATGATATGTATTACCTATACACAGGGATTACACAGGAAAGAGAACTCAGACCAGAGAAGTTATCCTTAAGGAAGCAGTTGAAGCTGAAATGTCAAGAGCAGAATCTCAGTCTTGTCCAAAACCCAGTTCTGTGTGGATATGGAGTGGATGCTGGCAGTAATCATCCCATGACAATCTTGAACTATAGCCAACAAAGTAAACTAAATATCCCAGTAAGGCAACCCATGCCTCCTGGAAAGAGAATGTTTCATGCCAAAGTTACGGAAAAAATCTCAGCAGGATACACTATTGAAACTGTTATTGATGGAAAGCCACTTCATGGAATTCTGTTTTCAAACAAGCCAAACATTCAAAGTCCAGTTGCTAACACTTCTTCCAATAGGAAAAGGACTGCTGGTGAAATTGAAAATGTTGCTTTAAATGACATGCTTATGCAATCAGACAATGTAACAACTTCTACAGTGCTCAGGCAAGAGAAAATGGAAAATCAATCGGAATTACGGGGAGAGAGTTCAGAATTTCTTGAACCCCATAAAGAAGCAGATACTATTGCTGCGTCAAGTATCCCAACAACTGCTGCGGAATCCTTAAAGGATTCTGTCAACCCAGAACCTGAAGCTGTTTCTTTGAATCAAAATGATAATGAGAAAAATGACTCACCAAAACCCTTAATTGAGAGCTTGAAAAACGATGGATCCAATAATGAGACAAGTTCCAAAGATGAAATGCAAATTGGAGAGGACATAAATGTGCCAGTTTCCAATTGTGAAATTTCAGGACAAACGAGTGATGCGCCAAACTCTAATGCTGATGTCCTGAAACCTGCAGCAGCTGAGAGTTCTGTTTCTCCACCAAATCAAGGTGTGACAGATGATTGCACAACTCCAAGGACAGAAGGTCAAAGTGAACAAGAAAAATTAACTTGA 1848 0.4259 MRWEKVKGTGGEGPGRRWGHTCNAVRDGRLLYLFGGYGKFNCQTNQVHVFDTLRQSWSEPAVKGTPPTPRDSHSCSVVGDSLFVFGGTDGTRLLNDLHILDTSSHTWIFPTVRGEAPEAREGHAAAVIGKRLYVFGGCGRSANNTNDVYYNDLYILNTETYTWHRATTSGTPPSPRDSHTCSSWKNKIIVIGGEDEQDYYLSDVHVLDTDTLTWSKMCMSSQPLPPRAGHCTVSLGNSLFVFGGFTEAQCLYNDLHMLDIETGVWTKVATTPTGPSARFSVAGDCLDPHVGGVLLFLGGCNRSLEALDDMYYLYTGITQERELRPEKLSLRKQLKLKCQEQNLSLVQNPVLCGYGVDAGSNHPMTILNYSQQSKLNIPVRQPMPPGKRMFHAKVTEKISAGYTIETVIDGKPLHGILFSNKPNIQSPVANTSSNRKRTAGEIENVALNDMLMQSDNVTTSTVLRQEKMENQSELRGESSEFLEPHKEADTIAASSIPTTAAESLKDSVNPEPEAVSLNQNDNEKNDSPKPLIESLKNDGSNNETSSKDEMQIGEDINVPVSNCEISGQTSDAPNSNADVLKPAAAESSVSPPNQGVTDDCTTPRTEGQSEQEKLT 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00826 615 PANTHER KELCH REPEAT DOMAIN 1 108 - -
Viun9g00826 615 MobiDBLite consensus disorder prediction 587 609 - -
Viun9g00826 615 Gene3D - 169 320 IPR015915 GO:0005515
Viun9g00826 615 SUPERFAMILY Kelch motif 114 313 IPR015915 GO:0005515
Viun9g00826 615 SUPERFAMILY Kelch motif 3 148 IPR015915 GO:0005515
Viun9g00826 615 SMART kelc_smart 30 80 IPR006652 GO:0005515
Viun9g00826 615 SMART kelc_smart 187 237 IPR006652 GO:0005515
Viun9g00826 615 SMART kelc_smart 238 284 IPR006652 GO:0005515
Viun9g00826 615 SMART kelc_smart 81 130 IPR006652 GO:0005515
Viun9g00826 615 Gene3D - 1 168 IPR015915 GO:0005515
Viun9g00826 615 Pfam Galactose oxidase, central domain 17 67 - -
Viun9g00826 615 Pfam Galactose oxidase, central domain 226 273 - -
Viun9g00826 615 Pfam Galactose oxidase, central domain 175 225 - -
Viun9g00826 615 Pfam Kelch motif 117 160 - -
Viun9g00826 615 MobiDBLite consensus disorder prediction 499 615 - -
Viun9g00826 615 Pfam Kelch motif 69 107 IPR006652 GO:0005515
Viun9g00826 615 MobiDBLite consensus disorder prediction 561 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00826 Viun-Chr9 6147872 6154061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00826 107 313 Acyl Lipid Metabolism Gene Families AT3G05420 32.258 1.87e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00826 - - gmx:100785267 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00826 9 6147872 6154061 Viun9g00826 9 6147872 6154061 ECH
Viun3g04675 3 54142565 54149253 Viun9g00826 9 6147872 6154061 PCT