Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00814 ATGCGGCGACGGGCCGCCGATTTTCGGCGCCCGGTTCGGCGGCGGTTCGCTTATTGGATCTGGTTGCTTCTCGGCGCCTTCTCTCTTGCCGGTCTTGTTTTGTTCTTCCTGCAACATCATCACCGCGAATATCACGTACATCGCCCCTTTCTGGAGAGAAATGCTAAAGTAGAAAATTCTCCTAAGAGATTGAATTTTACTGAAGAAATTTTAAGTCCAGCATCGTTCTCACGGCAACTATCAGAGCAAATGGTTCTGGCCAAGGCTTATGTGATTATTGCCAAAGAGCACAATAATCTTCACCTTGCCTGGGAACTTAGCTCAAAAATTAGAAGTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGGCTGTGACCATGGAGGAAGCTGGGCCAGTTATTAAAAGTTTGTCTTCTCTAATTTTCAAGGCACAGGATGTCCATTATGACATTGCAACCACTATAGTGACGATGAAATCATATATTCAAGCACTTGAAGAACGTGCAAATAAAGCAACAATTCAAAGCACTGTGTTTGCTCAACTATCAGCTGAAGCACTACCCAAGAGTCTTCATTGCTTAAATGTGAAACTTATGACTGATTGGCTAAAGATGACATCCTGGCAAAAATTTTCACATGAGAGTAGAATCTCTCCCCAGCTCACAGATAATAACCTATATCACTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTTGTTGTTAACTCAACAGTCATCAATGCAAATAATCCAAATCGCTTCGTCTTTCACATCGTTACCGATGGTATTATTTATGGAGCAATGAAAGAATGGTTCCATAGTAATGATTTAAAAGGGGCTACCATAGAGGTGCAGAATATTGAGGAATTTCATTGGTTGAATGAATCTTATGCTCCAATCATCAAACAGCTACACAGTCCAGAATCACGAACCTTTTATTTTGGACCTTATCAAGGTGTAAATGTTGAGCCAAAATTGCAGAATCCCAAGTTTGTGTCTTTGCTAAATCATCTTCGGTTTTATATCCCTGAGATTTATCCATTACTTGAGAAGATTGTTTTCCTTGATGATGATGTTGTTGTTCAGAAGGACCTAAGCCCACTTTTTTCACTGGATTTGCATGGAAATGTGAATGGTGCCGTTGAAACTTGTCTAGAAGCATTCCATAGGTACTACAAGTATCTCAACTTTTCAAATTCAATTATAAGCTCAAAGTTTGATCCACAGGCATGTGGATGGGCCTTTGGTCTGAATATTTTTGACCTGGGTGCATGGAGGAAAGCAAATGTCACCGCGAAGTATCATTATTGGCAAGAGCAGAATGCTGATGGGACACTCTGGAAGCTTGGTACACTTCCCCCTGCTCTTCTAAGTTTTTATGGCTTGACAGAACCACTTGACAGAAGATGGCATGTATTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTGATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAACCATGGCTGAAGTTAGCTATAGGCAGGTATAAGCCATTATGGCACAGGTACATAAATGAAAGTCACCCTCATCTACAAGATTGTGCCACCAGTTAA 1605 0.4112 MRRRAADFRRPVRRRFAYWIWLLLGAFSLAGLVLFFLQHHHREYHVHRPFLERNAKVENSPKRLNFTEEILSPASFSRQLSEQMVLAKAYVIIAKEHNNLHLAWELSSKIRSCQLLLSKAAMTGEAVTMEEAGPVIKSLSSLIFKAQDVHYDIATTIVTMKSYIQALEERANKATIQSTVFAQLSAEALPKSLHCLNVKLMTDWLKMTSWQKFSHESRISPQLTDNNLYHFCIFSDNVLATSVVVNSTVINANNPNRFVFHIVTDGIIYGAMKEWFHSNDLKGATIEVQNIEEFHWLNESYAPIIKQLHSPESRTFYFGPYQGVNVEPKLQNPKFVSLLNHLRFYIPEIYPLLEKIVFLDDDVVVQKDLSPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACGWAFGLNIFDLGAWRKANVTAKYHYWQEQNADGTLWKLGTLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWHRYINESHPHLQDCATS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00814 534 FunFam Hexosyltransferase 231 527 - -
Viun9g00814 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Viun9g00814 534 CDD GT8_like_1 229 522 - -
Viun9g00814 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 531 IPR029044 -
Viun9g00814 534 Pfam Glycosyl transferase family 8 233 508 IPR002495 GO:0016757
Viun9g00814 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 68 532 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00814 Viun-Chr9 6068014 6072244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00814 1 531 Glycosyltransferase AT2G20810 53.358 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00814 K13648 - gmx:100817381 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00814 9 6068014 6072244 Viun9g00814 9 6068014 6072244 ECH
Viun3g04689 3 54289518 54293448 Viun9g00814 9 6068014 6072244 PCT