Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04689 ATGCGACGACGGGCTGCCGATTATCGGCGCCCGGTTCGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTCGCCTTCTCCTCTATCCTTGCTCTCCTTCTCTTCCTTCTCCAACACAACCACCACCACCAAGATCCGCATCATTATCCTTTGCCGGAGAGAAATGAAAGAGTTGAACAATTTGCTAAGGAGAGTTTGAATTTTACTCAAGAGATTTTAAGTGTTACATCATTTTCACGACAGTTAGCAGAACAAATGATTCTGGCCAAAGCTTATGTGGTTATTGCCAAAGAGCATAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAATTGCCAGCTTTTGCTTTCAAAAGCGGCCATCACTGGTGAGCCCATCACGTTGGAGGAAGCAGAGCCAATTATTAGAAGCCTTTCTCTTCTAATGTTTAAGGCACAAGATATCCATTATGACATTGCAACCACAATAGTGACCATGAGATCACATATTCAAGCTCTAGAAGAGCGAGCCAATGCAGCAATAGTTCAAAGCACCGTGTTTGGTCAAATAGCAGCTGAAGCAATACCCAAAAGTCTTCACTGTCTAAATGTGAAACTCATGTCTGATTGGCTAAGGATGCCTTCCCTGCAGGAACTCTCAGATGAGAGGAAAAACTCCCCACGGCTTGTGGACAACAATCTCTATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAATGCTGACCATCCAAAGCAATTGGTCTTTCACATTGTCACTAATGGAGTCAGTTATGGGGTAATGCTAGCATGGTTCCTACGTAATGACTTTAAAGGAGCCACCATAGAGATACAGAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCTCTTGTCAAGCAGCTCCTTAATCCTGATTCAAGAACCTTCTATTTTGGAGCATATCAAGATTTAAATGTTGAACCCAAAATGCGGAATCCCAAGTATCTGTCTTTATTGAATCATCTTCGGTTTTACATCCCTGAGATTTATCCGCAACTTGAGAAGGTTGTCTTCCTGGATGATGACCTTGTTGTCCAGAAGGATCTGACCCCACTTTTCTCACTGGATTTGCATGGGAATGTGAACGGTGCTGTGGAAACTTGTCTGGAAGCCTTTCATAGATACTACAAGTATATCAACTTCTCAAATTCAGTTATTAGCTCGAGATTTGATCCACAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGAGGAAGGCAAATGTGACCGGAAGATATCACTATTGGCAGGACCAGAATGCTGATGGGACACTCTGGAAGCTGGGGACACTTCCTCCTGCTCTTTTGTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAACATTGACAATCGCCTCATTGAAAGTGCGGCAGTCATTCACTTCAACGGGAACATGAAACCGTGGTTGAAGTTAGCCATAGGCAGGTACAAGCCCCTATGGGACAAGTACATAAATCAAAGTCACCCTCATCTTCAAGATTGTGTCACAAGTTGA 1611 0.4302 MRRRAADYRRPVRRRFSYWIWLLLAFSSILALLLFLLQHNHHHQDPHHYPLPERNERVEQFAKESLNFTQEILSVTSFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRNCQLLLSKAAITGEPITLEEAEPIIRSLSLLMFKAQDIHYDIATTIVTMRSHIQALEERANAAIVQSTVFGQIAAEAIPKSLHCLNVKLMSDWLRMPSLQELSDERKNSPRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGVSYGVMLAWFLRNDFKGATIEIQNIEEFHWLNASYSPLVKQLLNPDSRTFYFGAYQDLNVEPKMRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYINFSNSVISSRFDPQACAWAFGMNIFDLVAWRKANVTGRYHYWQDQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHLQDCVTS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04689 536 FunFam Hexosyltransferase 233 529 - -
Viun3g04689 536 Pfam Glycosyl transferase family 8 235 510 IPR002495 GO:0016757
Viun3g04689 536 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 62 534 IPR029993 GO:0047262
Viun3g04689 536 CDD GT8_like_1 231 524 - -
Viun3g04689 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 233 533 IPR029044 -
Viun3g04689 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 534 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04689 Viun-Chr3 54289518 54293448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04689 1 533 Glycosyltransferase AT2G20810 55.019 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04689 K13648 - gmx:100805886 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04689 3 54289518 54293448 Viun3g04689 3 54289518 54293448 ECH
Viun3g04689 3 54289518 54293448 Viun9g00814 9 6068014 6072244 PCT