Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00570 ATGTGGAGAGGTTTTGTGCTGTATTGCACTGTGATGGATTCTTCGTCTCGTCTTTCGAGTCCTCCTTTGTCAAGAAATTCAGCTCGTGGAATATTTTGCTCCCGGTCCCTCAATCTAAGGTCAATTAGTGCCATTGGATATGACATGGACTATACCTTGGTGCATTATAATGTGAAGGCTTGGGAAGGGCTGGCCTATGACTACTGTATGGAAAACCTCAAGAAAATGGGTTTCCCTGTGGATGGACTTACATTTGATCCAGACCTGGTTATTAGAGGTCTTGTCATAGATAGAGAGAGAGGTAATTTGGTTAAAGCCGATCGATTTGGTTGTATAAAAAGAGCCATGCATGGAACCAAGATGTTGTCTACTCAAGCTGTGAGGGAGATATATGGGAGTGAGCTGGTGGACTTGCGGATAGAGGGTCGATGGGTGTTTTTGAGCACATTCTTCTCCGTGTCGGAAGCTGTGGCTTACATGCAGATGGTTGACATATTGGATGATGGGATTATACCAGCCAATCTTGGATACTTTGATTATAAAGGGCTTTATAAGGCTATGGGAATAGCCCTTGTCACAGCACATCTAGAAGGTCACCTCAAGAATGAGATTATGTCCAACCCTGAACAATTTGTGGAGCTCGATCCAGAATTGCCCGTCACGCTTTTGGATCAAAAGGAGGCCGGAAAAAAGCTTGTCCTCATTACCAATTCAGATTATCATTATACAGACAAAATGATGCGTTATTCCTTTAATAGATTCCTTCCTAGTGACATGGGTTGGCGAGATTTATTTGACATTATTGTTGTCTCAGCAAACAAACCAGAATTCTTCCAAATATCACACCCCATGTATGAGCTGGTGACAGATGAGGGTTTGATGCGTCCATGCTTTAAGGTTCAAATTGGTGGTTTGTACTCAGGAGGGAGTGCAAAGATGGTTGAAAGTTCCCTGAATATACATGGCAATAACATACTTTACATTGGAGACCACATTTACACTGATGTTAACCAATCCAAAGTCAATTTGCAATGGCGAACAGCATTGATATGTCGGGAATTAGAAGAAGAATATAATGCCTTAATTCATAGTCGAGGTTATAGACAATCACTGTTGGAGCTTATAAATCAAAAGGAAGTTGTTGGTGATATCCTTAACCAACTACAACTAACTCTACAGAGGCGAAGTAAAAGGCTTAATGCTCAGACCATTGCTGCAACTGACATGGACAATGAAAATCTTAGTCAAAGCATGAAGAAATTACTTGTCGTTATGCAAAAACTAGATGGAAAAATTGCTCCAATGCTAGAGGCAGATGGAGCTCTCTTCAATAAAAGGTGGGGCTATCTATCACGTGGTGATTTTTGGGATAAAAGCCACTTGATGCGACAAATTGAGAAGTATGCAGATATATATACCTCTAGGGTGTCGAACTTTCTATATTACACACCCTTTATGTATTTCCGCTCACAGGAGCAGAAACCTGCACATGATTCATACACACACTATAGCTCTCAACTGGATCAGTTTCCTTCCAATGGAAAATTGAACTAA 1554 0.4099 MWRGFVLYCTVMDSSSRLSSPPLSRNSARGIFCSRSLNLRSISAIGYDMDYTLVHYNVKAWEGLAYDYCMENLKKMGFPVDGLTFDPDLVIRGLVIDRERGNLVKADRFGCIKRAMHGTKMLSTQAVREIYGSELVDLRIEGRWVFLSTFFSVSEAVAYMQMVDILDDGIIPANLGYFDYKGLYKAMGIALVTAHLEGHLKNEIMSNPEQFVELDPELPVTLLDQKEAGKKLVLITNSDYHYTDKMMRYSFNRFLPSDMGWRDLFDIIVVSANKPEFFQISHPMYELVTDEGLMRPCFKVQIGGLYSGGSAKMVESSLNIHGNNILYIGDHIYTDVNQSKVNLQWRTALICRELEEEYNALIHSRGYRQSLLELINQKEVVGDILNQLQLTLQRRSKRLNAQTIAATDMDNENLSQSMKKLLVVMQKLDGKIAPMLEADGALFNKRWGYLSRGDFWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQKPAHDSYTHYSSQLDQFPSNGKLN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00570 517 PIRSF NT5C2 12 515 IPR016695 -
Viun9g00570 517 SUPERFAMILY HAD-like 29 500 IPR036412 -
Viun9g00570 517 CDD HAD_cN-II 32 378 - -
Viun9g00570 517 Gene3D - 191 381 IPR023214 -
Viun9g00570 517 Pfam 5' nucleotidase family 31 499 IPR008380 -
Viun9g00570 517 FunFam Haloacid dehalogenase hydrolase 190 381 - -
Viun9g00570 517 NCBIfam HAD-IG family 5'-nucleotidase 31 371 IPR008380 -
Viun9g00570 517 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 25 497 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00570 Viun-Chr9 4242005 4265199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00570 - - vun:114174902 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05560 3 61408671 61416145 Viun9g00570 9 4242005 4265199 PCT