Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00477 ATGGCGCACAATAGCAGCAACAGCACCGCCGCAGTGGATGGCGGTCCACACCGAGTCAACAGCCCGCGTTACTCCGGCTCCATGACTCGCCGAGCCCACTCGTTCAAACGCAAGAACAACAACAACAATAACATCAATGAAATTGAGCTTCAAATCAACTCGCCCAGATCCCCCTTGGCTCCTGCTGAAGGGTCTCTTTTGAAAAGGAATAATCTTCACCATCACCACAATCATCATTTGAGCCACAAGGAAAAAAGGAACAAGTTTGGGCAATGGGTGTTCTTTCTCTTCTGCGGGGTGTGTCTTTTTGTGGGTCTTCTCAAGATTTGTGCCACTGCCTGGTGGTTCCGATCTTCAGTACACAGTACACGTGAATCCGTTCAGGAACTATCTGACTCCATTAATAATCGAAATCTAATGGATCAAAGCTCTCATGGTTATGCACATAGGGAGGGAGCAAATGAGGTTGAAAGAACTCTCAAGATGGTAACTGCAGGAATGATTGACAGCCACACTGACATGGCTGTAGAATCAGGAATCTGGTTTAATCCCAACTATGAGAATTTCACGCAATGTATAGACCTGCCAAGAATTCATAAAAAGCTTGATGCAAAGACCAATGGCTACATTCTTGTAAATGCTAATGGTGGCCTGAATCAAATGAGATTTGGGATATGTGATATGGTCGCTGTTGCTAAGATTATGAAGGCAACACTTGTTCTTCCTTCTCTTGATCACACTTCGTACTGGGGTGATGCAAGTGGCTTCAAGGATTTGTTTGACTGGAAACATTTTATTGAGACACTGAAGGGTGATATCGAAGTAGTTGAGAGATTACCACCTGCTTATGCTGAAACTGAACCTTTCTCCAAAACTCCAATATCTTGGTCTAAGACCAGTTATTACAAGAATGAGGTTCTTCCACTCCTAAAGCAGCACAAAGTGATCTATTTCACCCATTCTGATTCCAGGCTTGCTAATAATGGAATTCCAAGCTCAATACAAAAACTAAGATGTCGTGTAAATTATAGAGCACTGAAATATTCCTCTCCAATTGAAGAATTTGGAAACAAATTAATATCCAGATTGCGACAGAATGATGAAAGTCCTTATCTTGCGCTTCATTTGAGGTATGAGAAGGATATGCTCGCATTTACAGGCTGCAGTCACAATTTGACTGCAGAGGAAGATGAAGAACTGCGACAGATGCGACATGAAGTTGGTCACTGGAAGGAGAAGGAGATTAATGGGACTGAGAGGAGATTAACAGGGGGTTGTCCATTAACTCCGAGGGAAACTTCCCTATTGCTCAGAGCACTGGATTTTCCATCACAAACCAGGATTTATTTGGTAGCCGGCGAATCGTATGGTAGAGGAAGTATGAAATATCTTGAGGACGATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCCAAAGAAGAGTTGAATCCTTACAAGAATCACCAGAACATGTTAGCTGGTATAGACTATATTGTTGCACTTCAGAGTGATATATTTCTCTATACTTATGATGGGAATATGGCAAAAGCAGTACAAGGTCACAGGCGCTTTGAAAACTTCAAGAAGACCATCAATCCAGACAAGGCAAATTTTGTTAAACTGGTTGATAAGTTGGATGAAGGAAAAATTTCTTGGAAGAAGTTCAGGTCCAAGGTAAAAGTACTTCACAAAGAGCGAATGGGTGCTCCATACCTTAGGGAGCGTGGAGAATTTCCTAAGCTAGAGGAAAGTTTTTATGCAAATCCTATGCCAGGTTGTATATGTGAAACAAAACAAGATTAG 1806 0.4203 MAHNSSNSTAAVDGGPHRVNSPRYSGSMTRRAHSFKRKNNNNNNINEIELQINSPRSPLAPAEGSLLKRNNLHHHHNHHLSHKEKRNKFGQWVFFLFCGVCLFVGLLKICATAWWFRSSVHSTRESVQELSDSINNRNLMDQSSHGYAHREGANEVERTLKMVTAGMIDSHTDMAVESGIWFNPNYENFTQCIDLPRIHKKLDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWGDASGFKDLFDWKHFIETLKGDIEVVERLPPAYAETEPFSKTPISWSKTSYYKNEVLPLLKQHKVIYFTHSDSRLANNGIPSSIQKLRCRVNYRALKYSSPIEEFGNKLISRLRQNDESPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRHEVGHWKEKEINGTERRLTGGCPLTPRETSLLLRALDFPSQTRIYLVAGESYGRGSMKYLEDDFPNIFSHSSLSSKEELNPYKNHQNMLAGIDYIVALQSDIFLYTYDGNMAKAVQGHRRFENFKKTINPDKANFVKLVDKLDEGKISWKKFRSKVKVLHKERMGAPYLRERGEFPKLEESFYANPMPGCICETKQD 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00477 601 MobiDBLite consensus disorder prediction 1 45 - -
Viun9g00477 601 FunFam O-fucosyltransferase 28 340 535 - -
Viun9g00477 601 PIRSF UCP009360 56 600 IPR024709 -
Viun9g00477 601 PANTHER OS02G0726500 PROTEIN-RELATED 85 597 - -
Viun9g00477 601 CDD O-FucT_plant 209 531 IPR024709 -
Viun9g00477 601 Pfam GDP-fucose protein O-fucosyltransferase 209 525 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00477 Viun-Chr9 3386672 3390279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00477 95 600 Miscellaneous Gene Families AT2G37980 57.006 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00477 - - gmx:100807090 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00477 9 3386672 3390279 Viun9g00477 9 3386672 3390279 ECH
Viun3g05442 3 60377959 60384651 Viun9g00477 9 3386672 3390279 PCT