Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00473 ATGGCTGGAATGTCAAAGGAAGAAGTGACTGGTAGTCCTAAATGGGGTGCTTCAATTATTATGCAGACAACAGAGGATGTGGCAAGAGCTGTTGCTTCTGCTGTAAATTCTCCAAGGCCATCCGTTATATATTCATCAAAAAATGATCAAGGTGGAAATCAATTTCAAAGGCTGCAGTATCAAGTTACAAAAATGATAAAAGGATTTTCTCGCCCTTCTGAAGTTAAATATAACAATTACAATCCGGAAATCCTGACAGCTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTACAGTACATGGACCATAGGTCATGGAAGGAGCCAACAAAGCTGTTTGAAAGCATGGTGGTTGTTGGACTTCATCCGAATTGTGATATTCAGGCACTGCAAAGACAATGTTTCTTAAGAAAGTCTGAAGGCCCTGGCAAATTAAGAAGTGCTCTTGGTTATCAGAATCAATCTCGTGTGGGGCCTAGTCTTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAACGACAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTCGAGAGAACACCTTCCATGAGTGAATTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATCTATCTTTTGTATTTAGACTACAGGGTGCTGATAATTCAACTCTTTATGGATGCTGTGTCTTGGTTGAAGAGTTAGTGCAAAAACCCTCTGGATTGCTTTCCCTGATTTCTGAGAAACGGTCAAGTTATTCTCCTTTGAAACGCGAACGCCATTTATTAACTACACAAAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTGTTGAACAGCATCTTCATGCAAGAACGACTAGATCGCTTGACGAAAAACATTGGAGATTTAGATTTAGAATATGTTGAAGATAGCTGTGGTGAAGACAATTTTGGGGAACATTCAGAGTGCACGTTGGTGAATGATAGATTAGAAGATAGACATGATGACAGTCCAACGATTTCTCAATCAAGCCTAATAAATTCCTTACCGGAAATCATTGAAGATGATAGTAGTTATCCCAAGAAAGAAATAGTTAACGTGGAGCTGCATATATTTAATGATAGAGTCAATGATGACAATCCTGTGTCTTGTGATCTTGAAAAGGATAAAAAAAATGTTAATGAAGAATCTGCCCCTACGAATGCTGACGATTGTGATTTGTATGGAGATGCTTTTGTAACTAATAAACAGTCAGAAGATAGGCGTTTACCCAATGCTATTCTACCACTCTTGCGGTATTGCCAGTATGAAAGTTCTGAATCTTCCTGCAGTTTTCAGGGCTCTCCTTGTGATGACAGGAATTTCAGGAGTGATGCCGATGATACCGAGACTGAAGATGCTTCGTTCTCTGGTCAAGAGGATTTGAATGACCTAAATGTTATTCTTGAGTGGGCTAAGGCAAATAACTGTGGATTATTACAGATTATAAGTGAGTATTATTGCTTAAGTTGCCCTGCAAGGGGCACATCACTTAGGTTTCATCCTTTGGAGCACCTGCATCCTTTAGAATATCACAGACCAGATGATGCAATTCTACATCTTGCTGGTTCAACTGTTGATTTGAAATCTTTCAGTGCAGGCCTGGAATTTGCAGAGGCTCACAATTCTCTTCTGGCTGAGGAGGAGGCAACTGCATTATCTACATGGGCTGTAGGGTGCATGTGTGGTACCTTGAGACTTGAAAATGTGTTAGCATTCTTTGCAGGAGCTCTACTGGAGAAGCAGATAGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCGTCAGTTTTATCAGTTATTTCACTAATTCGGCCCTACCAATGGCAAAGCTTACTAATGCCGGTTCTACCAAATGACATGCTTGAGTTTCTGGATGCACCTGTGCCTTACATAGTTGGTATCAAAAACAAGACCAGTGAAGTTCAGTCAAAGTTAACTAATAATGTTATCGTGGTTGACGCCAACAGGAATCAGGTGAGGTCATCAGCAATACCTCAACTGCCACGGCAGAAAGAGTTGATCGCTTCTTTACGCCCTTATCATGCAACTCTAGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTATATGAATGCACAGAAGTACAGGTAGAAGCTGCCAAGGGGTTCTTATCGGTGTTAAGGACTTATTTGGATTCCCTTTGCCATAACATTCGTTCGCATACAATAACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATCGACTCATTTCCTTATCGTGATAGGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTGCACACAGATCTTGTTCTCTCTTTCTTCCAAAAGGAATAG 2424 0.4084 MAGMSKEEVTGSPKWGASIIMQTTEDVARAVASAVNSPRPSVIYSSKNDQGGNQFQRLQYQVTKMIKGFSRPSEVKYNNYNPEILTAQKRQWAANFQLQYMDHRSWKEPTKLFESMVVVGLHPNCDIQALQRQCFLRKSEGPGKLRSALGYQNQSRVGPSLEPQVLFVYPPEKQLPLNDKDLLSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSLISEKRSSYSPLKRERHLLTTQRCYCILSRLPFFELHFGVLNSIFMQERLDRLTKNIGDLDLEYVEDSCGEDNFGEHSECTLVNDRLEDRHDDSPTISQSSLINSLPEIIEDDSSYPKKEIVNVELHIFNDRVNDDNPVSCDLEKDKKNVNEESAPTNADDCDLYGDAFVTNKQSEDRRLPNAILPLLRYCQYESSESSCSFQGSPCDDRNFRSDADDTETEDASFSGQEDLNDLNVILEWAKANNCGLLQIISEYYCLSCPARGTSLRFHPLEHLHPLEYHRPDDAILHLAGSTVDLKSFSAGLEFAEAHNSLLAEEEATALSTWAVGCMCGTLRLENVLAFFAGALLEKQIVFVCSNLGILSASVLSVISLIRPYQWQSLLMPVLPNDMLEFLDAPVPYIVGIKNKTSEVQSKLTNNVIVVDANRNQVRSSAIPQLPRQKELIASLRPYHATLVGESYLGRRRPVYECTEVQVEAAKGFLSVLRTYLDSLCHNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRPFMKLFVDTQLFSVHTDLVLSFFQKE 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00473 807 SMART uDENN_cls 109 242 IPR005113 -
Viun9g00473 807 ProSiteProfiles Tripartite DENN domain profile. 146 807 IPR037516 -
Viun9g00473 807 Pfam uDENN domain 163 240 IPR005113 -
Viun9g00473 807 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 45 803 - -
Viun9g00473 807 Pfam DENN (AEX-3) domain 565 679 IPR001194 -
Viun9g00473 807 SMART DENN_cls 273 681 IPR001194 -
Viun9g00473 807 Gene3D - 100 310 - -
Viun9g00473 807 Gene3D - 576 743 IPR043153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00473 Viun-Chr9 3351750 3363460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00473 - - var:108331642 1526.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00473 9 3351750 3363460 Viun9g00473 9 3351750 3363460 ECH
Viun3g05430 3 60318187 60332764 Viun9g00473 9 3351750 3363460 PCT