Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05430 ATGACTGGAATGTCCAAGGAAGAAGGGTCAGCTAGTCCTAGTTGGGGTGCTTCATTTTTTATGCAGACAAGAGAGGATGTGGCTAGAGCTGTTGCTGCTGCTGTTAACTCTCCGATGTCATCAAAAGATGATAATAGTGGTAGTCAACTTCAAAGGCTTCAGTATCAAGTTGCTCGAATGTTAAAAGGCTTTTCACACACTCCTGATGTTGAAAACACAAATTATAATCCTGAAATCCTGACTAGTCTGAAGCGTCAGTGGGCTGCAAACTTTCAGTTGCAGTATATGGACCATAAGACTTGGAAGGAGCCCTCACGACTATTTGAGAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATGTTCAGGCACTGCAAAGGCAATATCTTGATAGGAAGTTTGAAGGCTCTGCTAAATTAAGAAGTGCTCTTGGTTATCAGAGTGAATCTTGTGTAGAACCCAATATTGAACCTCAGGTCTTATTTGTCTACCCTCCAGAAAAACAGCTGCCTCTTAAATGCAAAGATCTTCTTTCTTTCTGCTTCCCGGGAGGCTTAGAGGTCCGTGCGGTTGAGAGAACCCCTTCCATGAGTGAGTTGAACGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATTTGTCATTTGTATTCAGGTTACAGGGTGCTGACAACTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGGAAAAGCCTTCTGGATTGGTTTCTCTGATTTCTGATAAGCAGCCTTCTTCCTCGTCTTTGAGACGACATATACTAACCACTCAGAGATGTTACTGCATTCTTTCAAGGCTTCCAGCTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCACTCAAGAAAGGCTAGAGCGGTTGACAAGAAGTGTTGGAGATTTAAATTTAGAATTTGATGAAGGTAATAGCTTAAAAGAAGAAAATCCAGAGGGCTACTCTGAGAGTGCTTTGGTGAGTGATGGACCAATAGAAGATAGACTTGGTGGAAATCCAATAATTTCTCCATTGAGAGCGGGAAATTCTACACCTGAAAACATCGTGGATGATGGTCAACCAAAGCACCTAGTGGTTGATGGGGAGCTGCAGACATATAAGGAGAGAATCAACTATGATGATGTTTTGGTTGCTGATAATGTAACAGATAGTACAGCAGCCAAAGAAGATTCTGGCCCTACAAATTCTGAAAATAGTGATCAGTATGGAGATGCCTTTGCTACAAACAAACAGTCAGAAGACAAACATTTACCTAATGCTATTCTGCCCCTCCTGCGCTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGATCACCTTGTGAAGACAGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGAAGCATCTTTCTCCGGCCAAGAAGATTTAAATGACTTAAATGATATTCTTGAATGGGCAAAGGAAAATAACCATGGACCACTACAAATTATAAGCGAGTACTACCGTTTAAGTTACCCTGCCAGGGGCTCATCAGTTATATTTCATCCTCTGGAGCACTTGCATCCCTTGGAATATCAGAGATCAGCTGAGTCAGTTCTTCGTCTTGCTGGCTCAACAGTTGATTTGAAAACGTTCAGTACTGGTCTGGAGCTAGTTGATGCACATATTGCTCTTGTGGTGGAAGAGGCAAATGCACTATCTGTATGGGCTGTAGCTTGCTTGTGCGGTACATTGAGACTTGAAAATGTGTTAACGTTCTTTGCAGGAGTTCTGCTAGAGAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCCCTAATCCAGCCTTACCGGTGGCAAAGTCTGCTAATGCCAGTTTTACCAAATGACATGCTTGACTTTTTAGATGCACCTGTCCCTTATATAGTTGGTATCAGGAACAAGACTAGTGAAGTTCAGTCAAAGTTTACCAATGTCATTCTAGTTGATGCTGATAGAAACCAGGTGAAGTCACCAACAATACCACAATTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATTCAACTCTTGTAGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTATATGAATGCACGGAAGTGCAGATTGAAGCTGCAAAGGGATTCCTTTCGGTGTTAAGATCTTACTTGGATTCTCTTTGCTGTAACATCCGTTCTCACACGATCACCAATGTACAATCCAATGACGATAAGGTATCATTGCTTCTGAAGGAGAGTTTCATTGATTCCTTCCCTTACCGGGATCGGCATTTTATGAAGCTTTTCGTGGATACACAACTTTTTTCTGTACATACAGACCTTGTTCTCTCTTTGTTACAAAAGGAATAG 2400 0.4133 MTGMSKEEGSASPSWGASFFMQTREDVARAVAAAVNSPMSSKDDNSGSQLQRLQYQVARMLKGFSHTPDVENTNYNPEILTSLKRQWAANFQLQYMDHKTWKEPSRLFESMVVVGLHPNCDVQALQRQYLDRKFEGSAKLRSALGYQSESCVEPNIEPQVLFVYPPEKQLPLKCKDLLSFCFPGGLEVRAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVEKPSGLVSLISDKQPSSSSLRRHILTTQRCYCILSRLPAFELHFGVLNSIFTQERLERLTRSVGDLNLEFDEGNSLKEENPEGYSESALVSDGPIEDRLGGNPIISPLRAGNSTPENIVDDGQPKHLVVDGELQTYKERINYDDVLVADNVTDSTAAKEDSGPTNSENSDQYGDAFATNKQSEDKHLPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDNETEEASFSGQEDLNDLNDILEWAKENNHGPLQIISEYYRLSYPARGSSVIFHPLEHLHPLEYQRSAESVLRLAGSTVDLKTFSTGLELVDAHIALVVEEANALSVWAVACLCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPNDMLDFLDAPVPYIVGIRNKTSEVQSKFTNVILVDADRNQVKSPTIPQLPRQKELVSSLRPYHSTLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRHFMKLFVDTQLFSVHTDLVLSLLQKE 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05430 799 ProSiteProfiles Tripartite DENN domain profile. 138 799 IPR037516 -
Viun3g05430 799 MobiDBLite consensus disorder prediction 313 332 - -
Viun3g05430 799 SMART DENN_cls 266 673 IPR001194 -
Viun3g05430 799 Pfam uDENN domain 158 235 IPR005113 -
Viun3g05430 799 Pfam DENN (AEX-3) domain 547 673 IPR001194 -
Viun3g05430 799 Gene3D - 95 303 - -
Viun3g05430 799 SMART uDENN_cls 104 237 IPR005113 -
Viun3g05430 799 MobiDBLite consensus disorder prediction 445 475 - -
Viun3g05430 799 Gene3D - 569 735 IPR043153 -
Viun3g05430 799 MobiDBLite consensus disorder prediction 344 363 - -
Viun3g05430 799 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 40 789 - -
Viun3g05430 799 MobiDBLite consensus disorder prediction 394 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05430 Viun-Chr3 60318187 60332764 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05430 - - gmx:100801645 1446.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05430 3 60318187 60332764 Viun3g05430 3 60318187 60332764 ECH
Viun3g05430 3 60318187 60332764 Viun9g00473 9 3351750 3363460 PCT