Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00458 ATGAGTTTCATCTTCGGAAAGAGAAAAACACCCGCAGAGCTTCTGCGGGAAAATAAGAGGATGCTGGACAAATCAATTAGAGAAATTGAGCGCGAGAGGCAAGGTTTGCAAGCACAAGAGAAGAAATTGATTTTGGAGATAAAGAAAAGTGCTAAACAAGGCCAGATGGGAGCTGTCAGAGTCATGGCAAAAGATCTAGTTAGAACACGGCATCAGATTGAGAAGTTTTATAAGTTAAAATCTCAGCTCCAAGGTGTATCACTCCGAATTCAGACTTTGAAATCAACACAAGCAATGGGTGAGGCTATGAAGGGCGTGACAAAGGCCATGGGGCAAATGAATAGGCAGATGAACTTGCCATCTTTGCAGAAAATCATGCAAGAATTTGAGAGACAGAATGAGAAGATGGAATTGACATCTGAGATGATGGGAGATGCAATAGATGATGCTTTGGAAGGAGAAGAAGATGAAGAAGAAACTGAAGATCTAGTGAACCAAGTTCTTGATGAGATTGGAATTGACATCAACCAAGAGCTTGTAAATGCACCATCATCAGCTGTTGCTGCCCCAGCTGCAAAAACCAAGGTACCTCAAGTTGAAACTACTGGGAATGACGATGGAGGGATTGATAGTGACCTACAAGCTAGGTTAGACAATTTGAGAAAAATGTAG 672 0.4167 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVNQVLDEIGIDINQELVNAPSSAVAAPAAKTKVPQVETTGNDDGGIDSDLQARLDNLRKM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00458 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 221 IPR005024 GO:0007034
Viun9g00458 223 Gene3D - 6 181 - -
Viun9g00458 223 Coils Coil 119 139 - -
Viun9g00458 223 MobiDBLite consensus disorder prediction 185 223 - -
Viun9g00458 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Viun9g00458 223 Coils Coil 12 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00458 Viun-Chr9 3217948 3221924 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00458 K12191 - gmx:100526885 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00458 9 3217948 3221924 Viun9g00458 9 3217948 3221924 ECH
Viun3g05411 3 60239631 60242668 Viun9g00458 9 3217948 3221924 PCT