Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05411 ATGAGTTTCATCTTCGGAAAGAGGAAAACCCCTGCAGAAATCTTGAGGGAGAATAAGAGAATGCTGGACAAATCAATTAGAGAGATAGAACGAGAGAGACAAGTTTTGCAGTCACAGGAGAAGAAACTGATTTTGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGAGCTGTTAAAGTGATGGCAAAAGATCTTGTCAGAACTAGACATCAGATTGAAAAGTTTTATAAGCTCAAATCGCAGCTCCAGGGTGTATCCCTCAGAATTCAAACTTTGAAATCAACACAAGCGATGGGTGAGGCAATGAAAGGTGTGACTAAGGCAATGGGACAGATGAACAGGCAGATGAACTTGCCATCATTGCAGAAAATCTTGCAGGAATTTGAGTATCAGAATGATAGGATGGAATTGATTTCAGAGGTGATGGGAGACACAATGGATGATGCTTTTGAGGGGGATGAAGAAGAAGAAGAAACAGAAGAACTAGTGAATCAGGTTCTCGATGAGATTGGTATCAACATCAATCAAGAGCTTCTGAATGCACCATCAACAGCTGTTGCTGCTCCAGCTGCAAAGACTAAAGTGCCTCAAGTTGAAACTGCTGGCGATGATTCCGCCATAGATAGCGATTTACAAGCAAGGTTAGACAATTTAAGAAAAATGTAA 669 0.4111 MSFIFGKRKTPAEILRENKRMLDKSIREIERERQVLQSQEKKLILEIKKSAKQGQMGAVKVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKILQEFEYQNDRMELISEVMGDTMDDAFEGDEEEEETEELVNQVLDEIGININQELLNAPSTAVAAPAAKTKVPQVETAGDDSAIDSDLQARLDNLRKM 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05411 222 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 220 IPR005024 GO:0007034
Viun3g05411 222 Gene3D - 6 180 - -
Viun3g05411 222 Pfam Snf7 17 186 IPR005024 GO:0007034
Viun3g05411 222 Coils Coil 12 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05411 Viun-Chr3 60239631 60242668 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05411 K12191 - gmx:100526885 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05411 3 60239631 60242668 Viun3g05411 3 60239631 60242668 ECH
Viun3g05411 3 60239631 60242668 Viun9g00458 9 3217948 3221924 PCT