Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00455 ATGTTGTCGAGAATGGAGGCTGGGAAGAGGAGTGGTGGGGGTTCTAGTGCCCCGAAGAAATTGTTAAAGGATGTTGAAACCATTAACAAAGCTTTGTACTTGGATAGAGGGTCTTCAAGGAGTTCAATACCTGGTGCAAATTCTCGATCTAAATTCACTGGGAAACCTCAGTTACCTGATCCCAAATCTAAGTCTAAAACCAGTGTTAATAATAACAATGACGATGGTGTTCAAAAGGATAAGAAGTCTATTTGGAATTGGAGGCCTCTAAGGGCACTTTCCCACATCCGAAACAAGAGGTTTAATTGTAGTTTTTATCTGCAAGTTCACCTGATTGAAGGGTTGCCTCAAAGTTTCGATAATGCTAGTCTTGCTGTGTACTGGAAAAGGCGTGATGGGGTTCTTGTGACTGGTCCTGCCAAGGTGATTCAGTCTGTGGCTGAATTTGAAGAGAAGTTGACCTACACTTGCTCAGTGTATGGCAGTAGGAGTGGACCTCACCATTCTGCTAAGTATGAAGCAAAGCATTTTTTGCTCTATGCTTCGCTTCTGAGTGCCCAGGAGATGGATTTGGGAAAGCACCGGGTGGATCTGACAAGGTTGCTTCCTCTCACTCTGGAGGAGCTTGAGGAGGAGAAGAGCTCGGGGAAGTGGACTACTAGTTTTCGATTATCAGGAGTGGCTAAGGGTGCTGTGATGAATGTCAGTTTTGGCTATACGGTGGTTGGTGATAATGCTGGTACTACCAGAGACAGCCATAATGCTTCTAATGTATTGAGTTCCAGGCAGAATGGTTTTGCTCCGATGAAGCAAGATGTTAAACCCCGACAGTTTGATGGAAGCAGCAGGATGAGGCGAACCACGAGTTTGCAGTTATCACCTCGAGCTTCAGATGAGGTAAAGGATCTTCATGAGGTGTTGCCACTGACTAGGTCTGCACTAGCCAGCTCAATAGACATCTTATATAAGAAATTTGATGAGGAGAAGGCTAGTTCTCTGCTTAGCGATGCAGAACTTGATTCGTTCTCCGAAAATCTTGGGTCAATCAAGCCAGATGCATATGCTTCTGATCTTGGAAAAGAAACATTTGACGAGCATGTGAGTAATGTGAGTAAGGCTGAAGATAAATGTCTAATGCATGAGGAACCTGAACTTTCAGTGTTTCAAGAAAAGCTGGAGATATTTAAACCAGATGACGATCCTTTACCTGATTCCGCAAATGAAAACCCTGAACAGTTTCAAGGTAATGATTTTTTTGTTGTTGATAAGGGGATAGAACTGTCATCAAATGAACCTGTTATAACAGAGGAGTTCACTGTGAAGGCTCCTGAGGATGCTTCTACAGTTGATACTGCCTACACCCTTGGTATATCAGGTATACAACCTTTTGAAGACAGTGTTAAACATGATTTTCTGGATGAGGTTAATGATAGTTATAAGGACCAGGTAGTGATAGAGGAATTTGCTAGCAAAGAGGATGACTGTGACAGTGATACTAATGAGCTGCTCCTGCAAGAACTAGAATCGGCTTTAAATAGTGTATCAAATTTGGAGAGAGTGGCACTAGAATCTCCCAAAACAGCAGAATTTAAATCTGAACATAAGATGACAAAGTCACATAGCTTAGATGATGTTACAGAATCAGTTGCCTCTGAGTTTTTAAGCATGTTAGGCTTAGACCGTAGTCCAATGGCCTTGAGTTCCGAAGGTGAGCCTGAATCTCCAAGAGAGCTACTTTTAAGACAATTTGAGAAGGAGGCTTTGGATGGGGACTTTTCCTCTTTGTTTGATTTTGAAATGAACCATGATAATGAAGAAGATGGTGGCTATGATGGTTCCGCTGCATCTGAGCAGTGGAACTTTTCTGAAGATGTCAGGTCAACATCCCTTTTGCAAGAGCTGCAGGAGGAGCATCTAGCCGAGTCTCGGGATGTGAGAGGCAAGCAGAGGGCTCAGATACTAGAAGACTTGGAAACAGAAGCCTTGATGCGTCAATGGGGTTTGAATGAGGAGGCTTTTCATCGTTCTCCACCAAAAGATTTTACTGGTTTTGGAAGCCCAATTCCTTTGCCACCTGAAGAGCCTCCTATGTTGCCTCCTCTTGATGATGGGTTGGGCCCTTTTCTTCAGACAAAAGACGGGGGTTTCCTACGCTCTATGAATCCCTCACTTTTCAAGAATTCTAAAAGTGGTGGGAGTTTAATCATGCAGGTATCCAACCCTGTCGTGGTACCTGCTGAAATGGGTTCTGGGATAATGGAAGTTTTGCAGTGTTTGGCTTCGGTGGGAATTGAAAAGCTCTCAATGCAGGCCAAGGAGTTAATGCCGCTAGAAGATATCACAGGGAAGACAATGCAACAAGTAGCATGGGAAGCCATGCCTGTCTTAGAAGGAGCAGAGAGGCAAAGCCATTTGCAGCATAATCCAATAACAAGGCAAGACAGTGCTCATGTGCAAAGGGACTTGAAAGGAATGCCTTCAGTACAGAAGACTGGCAAGTTTAGTTCAAGAACAGTGGCCAACCAACCAAGCTCAGAGTTTGTTTCAGTTGAAGACCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATCCAATCTGGGATGTCAGAAGAGGAGGCACCATCAAACATCATTGCACAGTCCATTGGGGATATTTCGGCTCTTCAGGGCAAGGGTGTTGATATTAGTGGATCTCTTGGCCTGGATGGTGCTGCTGGCTTGCAGCTGATGGATGTAAAAGACGGAAGTGGTGGCGGCAGTGATGGTGTTGATGGAATAATGGGCTTATCATTAACTCTTGATGAATGGATGAGGTTGGATTCCGGTGAGATTGATGATATAGATAATATCAGTGAGCATACTTCCAAACTTCTTGCAGCCCATCATGCTAACTCTTTTGACTTCATTCGAGGGAGTTCCAAGGGAGAGAAGAGACGAGGCAAAAGCAGAAGATGTGGTTTGTTAGGAAACAATTTCACAGTAGCATTGATGGTGCAACTCCGTGACCCTCTGAGAAATTACGAACCGGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTCATGCTTCCAAAGCAAAAGATTTACAACAGTGTGTCTTTGATAATGAAAAACAATGACGAGGATGATGATGAGGATAGGGAAATCATAGCGAAGGTGGACATGAAGAACACCAAGAACGAGGAGAATAGTTCCGAAGAGGAAGAGGGCATTCCTCAGTTCAGAATCACAGAAGTCCATGTGGCAGGTCTGAAGCCTGAGCCTCAGAAAAAGAAGCTCTGGGGCTCTTCAAACCAGCAACAATCTGGTTCTCGCTGGTTGGTTGCTAATGGAATGGCGAAGAACAATAATAACAAACTTCCATTGATGAAGTCAAAGGGTTCATCTAAACCTAATGCTCCAGTTACCTCAAAGGTGCAACCTGGTGACTCCTTGTGGAGCATATCATCTCGTCTTTTTGGCAATCGAGGGAAATCACATGTAAGAAACCCCGATGTCGTTATGCCAAATGACACCACAAGACTCAGCTGA 3561 0.4395 MLSRMEAGKRSGGGSSAPKKLLKDVETINKALYLDRGSSRSSIPGANSRSKFTGKPQLPDPKSKSKTSVNNNNDDGVQKDKKSIWNWRPLRALSHIRNKRFNCSFYLQVHLIEGLPQSFDNASLAVYWKRRDGVLVTGPAKVIQSVAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSAQEMDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLSGVAKGAVMNVSFGYTVVGDNAGTTRDSHNASNVLSSRQNGFAPMKQDVKPRQFDGSSRMRRTTSLQLSPRASDEVKDLHEVLPLTRSALASSIDILYKKFDEEKASSLLSDAELDSFSENLGSIKPDAYASDLGKETFDEHVSNVSKAEDKCLMHEEPELSVFQEKLEIFKPDDDPLPDSANENPEQFQGNDFFVVDKGIELSSNEPVITEEFTVKAPEDASTVDTAYTLGISGIQPFEDSVKHDFLDEVNDSYKDQVVIEEFASKEDDCDSDTNELLLQELESALNSVSNLERVALESPKTAEFKSEHKMTKSHSLDDVTESVASEFLSMLGLDRSPMALSSEGEPESPRELLLRQFEKEALDGDFSSLFDFEMNHDNEEDGGYDGSAASEQWNFSEDVRSTSLLQELQEEHLAESRDVRGKQRAQILEDLETEALMRQWGLNEEAFHRSPPKDFTGFGSPIPLPPEEPPMLPPLDDGLGPFLQTKDGGFLRSMNPSLFKNSKSGGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQVAWEAMPVLEGAERQSHLQHNPITRQDSAHVQRDLKGMPSVQKTGKFSSRTVANQPSSEFVSVEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGKGVDISGSLGLDGAAGLQLMDVKDGSGGGSDGVDGIMGLSLTLDEWMRLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGSSKGEKRRGKSRRCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFMLPKQKIYNSVSLIMKNNDEDDDEDREIIAKVDMKNTKNEENSSEEEEGIPQFRITEVHVAGLKPEPQKKKLWGSSNQQQSGSRWLVANGMAKNNNNKLPLMKSKGSSKPNAPVTSKVQPGDSLWSISSRLFGNRGKSHVRNPDVVMPNDTTRLS 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00455 1186 MobiDBLite consensus disorder prediction 1 21 - -
Viun9g00455 1186 MobiDBLite consensus disorder prediction 271 295 - -
Viun9g00455 1186 MobiDBLite consensus disorder prediction 37 74 - -
Viun9g00455 1186 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 98 243 IPR019448 -
Viun9g00455 1186 MobiDBLite consensus disorder prediction 1165 1186 - -
Viun9g00455 1186 ProSiteProfiles C2 NT-type domain profile. 93 241 IPR019448 -
Viun9g00455 1186 Coils Coil 500 520 - -
Viun9g00455 1186 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1180 IPR039614 -
Viun9g00455 1186 MobiDBLite consensus disorder prediction 37 80 - -
Viun9g00455 1186 MobiDBLite consensus disorder prediction 1125 1152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00455 Viun-Chr9 3183892 3188379 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00455 - - gmx:100815106 1694.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00455 9 3183892 3188379 Viun9g00455 9 3183892 3188379 ECH
Viun3g05405 3 60172363 60176248 Viun9g00455 9 3183892 3188379 PCT