Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00402 ATGGTGGTGAAGAAGCCACGGATAGTGATAATTGGAGCAGGAATGGCAGGCCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCCTCCAAGGACTTGTTTGAGCTATGTGTTGTGGAGGGTGGAAGCAGGATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACCGTATTGAGATGGGTGCTACATGGATCCACGGAATTGGAGGCAGTCCAATTCACAAAATTGCTAAAGAAATCCACTCACTCCGCTCTGACCAACCTTGGGAGTGCATGGATGGGAACACTGATGAGGCCATCACCATTGCTGAAGGTGGCTTCCATCTCCACCCTTCCATTGTTGACCCCATTACAAAGCTCTTCAACACCCTCATGGAATATTCTCAAAGGAAGCTCAATGAAGCCACTGCAAAGGGTGAACTTGAAAGTTATCACAACCTGCCTGCTCTGGCTGCTAAGGTTGCTTCCAACAGGTCTGGGAACGACAACCTTAGTATTGGCTCTTTTCTGAGACAAGGCCTGGAGGCTTACCAGATTTCAAAGGAGCAAGAGGAGGTCAAAGGGTGTGGGGAGTGGAGCAGGAAGTTACTTGAGGAAGCAATATTTGCAATGCATGAGAACAACCAGAGGACCTATACATCAGCTGATGACCTCTTGACACTGGATTATAGTGCTGAGAGTGAGTACAGAATGTTCCCAGGTGAAGAAATCACTATTGCTAAAGGCTACTTGAGCATAATTGAGTCCTTAGCCTCTGTGTTGCCACCTGGTTTGATTCAGTTAGGTAGAAAAGTCACAAGGATTGAGTGGCAGCTTGATGAGAGGAAGGGTGTGGGAAATGGCTGTTGTTCTTCTAGGCCTGTGAAGCTGCATTTTTGTGATGGCTCCGTTATGTCTGCTGATCATGTCATTGTCACAGTTTCACTGGGAGTGTTAAAATCTGCTATTCGTGATGATGATGATGATGATGATTCAGGTATGTTCTGTCCTCCTCTTCCCCCTTCCAAAACTGAGGCAATTTCAAGGCTTGGCTTTGGGGTTGTTAACAAGTTGTTTATGCAATTAAGTCCAAAACATGGAGGAGGGAAACATGAATACCATCATGAACATGTAAATGAAGACTCCGACAAGGGGTTCCCTTTCCTGCAAATGGTTTTCCATTCACCTCAATCTGAAACGAGGCACAAGAAAATACCATGGTGGATGAGGAGGACAGCCACCCTTTTCCCCATCTACAACAATTCCAGTGTCCTCTTGTCTTGGTTTGTGGGGGAAGAAGCACTGGCACTCGAGTCACTCAAAGATGAGGAGATCATAAATGGAGTTTCATCCACAGTCTCGTGCTTTCTACAGCATTCTCAGTGGCAAAAGGGTTCCAGTTCACATAGATTGTGCAATGGGAATGTGAATTCTGAGGAGAGATCTCAAGAAAATGAGGTGAAGTTCAGTAAAGTCTTGAAGAGCAAATGGGGAACTGATCCCTTGTTTTTAGGCTCATACAGTTATGTTGCAGTAGGGTCAAGTGGTGATGATTTAGATGCAATGGCCGAGCCATTGCCAAAAGATAGCAGTTGTCAGCCTTCTGCTTCATCTCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTCAGGGAAGCCAATAGGCTTCTTCAACATTATCATTGTGTTGGGATTTATAATAACTAG 1734 0.4556 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGSRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAKEIHSLRSDQPWECMDGNTDEAITIAEGGFHLHPSIVDPITKLFNTLMEYSQRKLNEATAKGELESYHNLPALAAKVASNRSGNDNLSIGSFLRQGLEAYQISKEQEEVKGCGEWSRKLLEEAIFAMHENNQRTYTSADDLLTLDYSAESEYRMFPGEEITIAKGYLSIIESLASVLPPGLIQLGRKVTRIEWQLDERKGVGNGCCSSRPVKLHFCDGSVMSADHVIVTVSLGVLKSAIRDDDDDDDSGMFCPPLPPSKTEAISRLGFGVVNKLFMQLSPKHGGGKHEYHHEHVNEDSDKGFPFLQMVFHSPQSETRHKKIPWWMRRTATLFPIYNNSSVLLSWFVGEEALALESLKDEEIINGVSSTVSCFLQHSQWQKGSSSHRLCNGNVNSEERSQENEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDAMAEPLPKDSSCQPSASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00402 577 Gene3D - 8 343 IPR036188 -
Viun9g00402 577 Gene3D - 92 455 - -
Viun9g00402 577 SUPERFAMILY FAD/NAD(P)-binding domain 3 569 IPR036188 -
Viun9g00402 577 PANTHER FLAVIN MONOAMINE OXIDASE 6 571 - -
Viun9g00402 577 FunFam Putative polyamine oxidase 5 isoform A 3 116 - -
Viun9g00402 577 Pfam Flavin containing amine oxidoreductase 15 566 IPR002937 GO:0016491
Viun9g00402 577 Gene3D - 463 573 IPR036188 -
Viun9g00402 577 FunFam Putative polyamine oxidase 5 isoform A 510 564 - -
Viun9g00402 577 SUPERFAMILY FAD-linked reductases, C-terminal domain 345 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00402 Viun-Chr9 2850233 2853052 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00402 K12259 - gmx:100783032 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00402 9 2850233 2853052 Viun9g00402 9 2850233 2853052 ECH
Viun3g05349 3 59793711 59795643 Viun9g00402 9 2850233 2853052 PCT