Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05349 ATGGCGGTGAAGAAGGCACGGATTGTGATAATAGGAGCAGGAATGGCGGGGCTCACTGCTGCCAACAGGCTTCACAGTGTGAGTGCCTCAAAGAACTTGTTTGAGGTGTGTGTTGTGGAAGGTGGAAACAGGATTGGTGGGAGAATCAACAGTTCAGAGTTTGGTGGTGACCGGATTGAGATGGGTGCTACTTGGATCCATGGAATTGAAGGAAGTCCAATCCACAAAATAGCTCAACAAATCCATGCACTTGAGTCTGACCAGCCTTGGGAGTGCATGGATGGGAACGACAACAAGGCCACCACCATTGCTGAAGGTGGCTTTGTGCTAACCCCTTCCTTTGTCCACCCCATCACCAAGCTTTTCAACAGTCTCATGGACCATGCTCAGGGAAAGATGTCAACACCAACAACCAACGGCGACAGCGGAATCCTCAGCATCGGTTCTTTTCTCAGACAAGGCCTTGATGCTTATTGGGGTTCGTCAAAAGAGGAAAAGGAGCTGAAAGGGTTCGGAAAGTGGAATAGGAAGTTGCTTGATGAAGCAATCTTTGCCATGCACGAGAACACGCAGAGGACTTGTACATCTGTTTCTGACTTGTTGACTTTGGATTATGGCGCAGAAAGTGAATACCAAATGTTTCCGGGTGAAGAAATCACAATTGCTAGAGGCTACTCGAGCATAATTGAAACGTTAGCGTCTGTGCTACCACCTGGTTCAGTTCAGTTGGGAAGAAAAGTCACAAGAATCGAATGGCAACCCGAGAGACACGAGGCCAACGGAACATGTTCTAGGCCCGTGGTGCTACATTTCTCTGATGGCTCTATTATGTCTGCGGATCATGTCATTGTCACGGTTTCACTGGGGGTGTTGAAGGCTTCTATCCGTGATGATGGTGATTCAGGTATGTCGATGTTCCATCCCCCTCTACCCTCTTTTAAGGCTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTCATGCAATTGAGTCCTCCTCATGGGAGAAGAGAGGAACACCCCAGAGGGTTCCCCTTCTTGCAAATGGTTTTCCATTCACCAAACTCTGAGTTGAGGCACAAGAAAATACCCTGGTGGATGAGGAAAACTGCTACTCTTTGTCCTATCTACAACAACTCTAGTGTCCTCTTATCTTGGTTTGCCGGGGAAGAAGCTCTGGCACTTGAGTCACTCAAAGATGAAGAGATCATTAAAGGGGTTTCAGACACAGTTTCATGCTTCCTGTCACATTCAGTTGAGTTTTGCAACGGGAATGTGAATTCTGAAAAGCACTCCCACGAATACAATGTTAAATTCAGTAAAGTGTTGAAGAGCCAATGGGGAACAGATCCTTTGTTTTTAGGCTCATACAGTCATGTGGCAGTTGGATCAAGTGGAGATGATTTTGATACAATGGCAGAACCTTTGCCAAAATGCAGTAGCAGCAGTAGCAGCCACCCTTCTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACCCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTATTCAACACTATTCACCGTGTTAA 1605 0.4654 MAVKKARIVIIGAGMAGLTAANRLHSVSASKNLFEVCVVEGGNRIGGRINSSEFGGDRIEMGATWIHGIEGSPIHKIAQQIHALESDQPWECMDGNDNKATTIAEGGFVLTPSFVHPITKLFNSLMDHAQGKMSTPTTNGDSGILSIGSFLRQGLDAYWGSSKEEKELKGFGKWNRKLLDEAIFAMHENTQRTCTSVSDLLTLDYGAESEYQMFPGEEITIARGYSSIIETLASVLPPGSVQLGRKVTRIEWQPERHEANGTCSRPVVLHFSDGSIMSADHVIVTVSLGVLKASIRDDGDSGMSMFHPPLPSFKAEAISRLGFGVVNKLFMQLSPPHGRREEHPRGFPFLQMVFHSPNSELRHKKIPWWMRKTATLCPIYNNSSVLLSWFAGEEALALESLKDEEIIKGVSDTVSCFLSHSVEFCNGNVNSEKHSHEYNVKFSKVLKSQWGTDPLFLGSYSHVAVGSSGDDFDTMAEPLPKCSSSSSSHPSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLIQHYSPC 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05349 534 Pfam Flavin containing amine oxidoreductase 15 528 IPR002937 GO:0016491
Viun3g05349 534 SUPERFAMILY FAD/NAD(P)-binding domain 1 531 IPR036188 -
Viun3g05349 534 Gene3D - 94 468 - -
Viun3g05349 534 PANTHER FLAVIN MONOAMINE OXIDASE 7 532 - -
Viun3g05349 534 FunFam Putative polyamine oxidase 5 isoform A 469 526 - -
Viun3g05349 534 Gene3D - 8 526 IPR036188 -
Viun3g05349 534 SUPERFAMILY FAD-linked reductases, C-terminal domain 322 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05349 Viun-Chr3 59793711 59795643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05349 K12259 - gmx:100809633 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05349 3 59793711 59795643 Viun3g05349 3 59793711 59795643 ECH
Viun3g05349 3 59793711 59795643 Viun9g00402 9 2850233 2853052 PCT