Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00384 ATGATCAAAGGTAGCGACGTGTACGATGTAGTTGCAGCCATTGTGCCCCTCTACGTGGCTTTGATCTTAGCCTATGGCTCCGTCCGTTGGTGGAAGATCTTCACCCCAGAACAGTGCTCCGGCATAAACCGTTTTGTGTCGGTTTTTGGAGTGCCCTTCCTCTCTTTTCATTTCATATCCAACAATAACCCTTACACCATGAACTTCAGGTTCTTAGCCGCGGATTCTCTTCAAAAGGTTGTGATTTTGGCTGCACTTGTTCTGTGGAACGCTTTCACAAAGTGGGGTAGCATGAACTGGACCATCACACTGTTCTCACTCTCCACTCTCCCCAACACGCTCATCATGGGGGTTCCTCTTCTGAGAGCCATGTATGGAGACTTCACAACCGCGCTCATGATCCAAATCGTGGTTTTTCAGAGTGTGATTTGGTACACTCTCTTGCTGTTCATGTTCGAATATAGAGCGGCCAAGCTACTCATTCTGCAGAAATTCCCTGATACAGCAGGTGCTATATCCTCCGTTAGGGTTCATTCCCACGTTGGTTCTCTGAGTTGTCGAGAAATGCTCGAAACTAATGCAGAAACCGGAGAAGATGGGAATCTTCACGTGGTGGTCATGTCACGTTCCGTGTCCGTCGCATCAAAAGAACCAAGGCTGCGAAGTTCAAGTTCAAATTTTAGTGCCACAGATTCGCACCCACATGGTCTCAACAGAGAGGGGATGCTGAAAATGCATGAAAAGAGTTTTTCAAGGAGCAAGAGCGTTGGTCATGGTTTGGTTTCTCCGTATCTGTCTCTGAAACCAATAGGGGACAAGGAGACAGACAGTAACAAGGGTTTGCACATGTTTATGTCAACTTCGCCAACTTCTGATCCTAATGTGAGACATGCAGCGAATACTAGAGTTGGATCTTACATGGAATCTTCAAAGGATGTTGAAATTGAAGGTGTTGAAGGTCCTGTATTGAGGAGTCAGAACGATAACAGTGAAGGAGATTCAAACAAAAGGCAAGAAATGCCTCGTGCCAGAGTCATGATAAAGCTTATTCTCAGCATGGTTTGGAGGAATCTCATAAGAAACCCTAATACCTATGCAAGTGTTTTGGGTCTTGTTTGGTCTCTCATCTTTTTTAGGTGGAACATGAAGATGCCATCTATAATAAAAGGTTCCATAGAAATAATTTCAAATGCTGGGTTGGGAATGGCCATGTTCAGTTTAGGTCTTTTCATGGCGTTGCAACCGAAAATCATCACTTGTGGAAAAACTCGAGCTATGATTTCAATGTTAATTAAGTTTTTGGTTGGTCCAATGGTGATTCTTGCAACCTCCAAAGCCATGGGTGTCAATGGAGTTCTTTTAAAAGTTGCAGTTGTTCAGGCTTCTCTTCCAGAGGCTCTTGTTCCCTTTATATTTGCCAAAGAATATAATCTCCATGCAGACATACTCAGCACAGCGGTTATCTTTGGAATGGTGGTTGCTTTGCCAGTTACAATAATATACTACGTGATTCTTGGACTCTAA 1524 0.439 MIKGSDVYDVVAAIVPLYVALILAYGSVRWWKIFTPEQCSGINRFVSVFGVPFLSFHFISNNNPYTMNFRFLAADSLQKVVILAALVLWNAFTKWGSMNWTITLFSLSTLPNTLIMGVPLLRAMYGDFTTALMIQIVVFQSVIWYTLLLFMFEYRAAKLLILQKFPDTAGAISSVRVHSHVGSLSCREMLETNAETGEDGNLHVVVMSRSVSVASKEPRLRSSSSNFSATDSHPHGLNREGMLKMHEKSFSRSKSVGHGLVSPYLSLKPIGDKETDSNKGLHMFMSTSPTSDPNVRHAANTRVGSYMESSKDVEIEGVEGPVLRSQNDNSEGDSNKRQEMPRARVMIKLILSMVWRNLIRNPNTYASVLGLVWSLIFFRWNMKMPSIIKGSIEIISNAGLGMAMFSLGLFMALQPKIITCGKTRAMISMLIKFLVGPMVILATSKAMGVNGVLLKVAVVQASLPEALVPFIFAKEYNLHADILSTAVIFGMVVALPVTIIYYVILGL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00384 507 NCBIfam auxin efflux carrier 1 507 IPR014024 -
Viun9g00384 507 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 507 - -
Viun9g00384 507 MobiDBLite consensus disorder prediction 216 238 - -
Viun9g00384 507 Pfam Membrane transport protein 10 502 IPR004776 GO:0016020|GO:0055085
Viun9g00384 507 MobiDBLite consensus disorder prediction 317 338 - -
Viun9g00384 507 MobiDBLite consensus disorder prediction 216 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00384 Viun-Chr9 2699930 2703394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00384 1 507 Organic Solute Cotransporters AT1G23080 45.691 9.77e-172 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00384 K13947 - gmx:100788935 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00384 9 2699930 2703394 Viun9g00384 9 2699930 2703394 ECH
Viun3g05319 3 59592945 59595660 Viun9g00384 9 2699930 2703394 PCT