Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05319 ATGATAACCATTAAGGATATTTATGATGTTTTCGCGGCTATTGTGCCCCTTTACGTGGCTATGATATTAGCATATGGTTCAGTTCGGTGGTGGAAAATTTTCACACCTGATCAATGTTCTGGTATAAACCGCTTTGTTGCTGTGTTCGCAGTTCCACTGCTTAGTTTCCACTTCATCTCCTCCAATGACCCTTATGCTATGAACTACCACTTCATAGCAGCTGATTGTCTTCAGAAAGTTGTCATTCTGGGTGCTCTCTTTCTATGGAACACCTTCACAAAACATGGCAGCCTGGACTGGACCATCACCCTGTTCTCTCTTTCCACTCTTCCAAACACCCTTGTCATGGGGATCCCTCTATTGAAGGCCATGTATGGGGACTTTTCAGGGAGCCTCATGGTTCAAATTGTGGTGCTGCAAAGTGTCATATGGTACACCCTCATGCTGTTCTTGTTTGAATATAGAGGTGCCAAACTCCTCATCACAGAACAGTTCCCTGAGACTGCAGGCTCCATCACCTCCTTCAGGGTTGACTCAGATGTTGTCTCACTCAACGGTAGAGAGCCACTGCAAACGGATGCCGAGATAGGAGAAGATGGAAAGCTCCATGTGGTGGTTAAGAGATCAGCAGCTTCTTCTATGATATCTTCCTTCAACAAATCCCATTTAACTTCTATGACTCCTAGAGCATCTAATCTCACTGGGGTAGAGATCTATTCCGTTCAGTCATCAAGAGAACCAACCCCAAGAGCTTCAAGTTTCAATCAAACAGACTTCTATGCCATGTTTGCGAGCAAGGCACCGAGTCCAAAGCATGGCTACACAAACAGTTTCCAGAGTAATAGTGGTATCGGTGATGTTTACTCGTTGCAATCTTCCAAGGGGGCAACACCAAGGACTTCTAATTTTGAAGAGGAGATGTTGAAGATGCACAAAAAGAGAGGAGGGAGAAGCATGAGTGGAGAGTTGTTTAATGGAGGTTTGGTTTCTTCTTACCCACCTCCGAATCCAATGTTTTCAGGGTCCACAAGCGCCGGTGGCCTCAAAAAGAAAGATAGCAGTGGTGGCAGTGCTGCACCTAACAAGGAGTTACACATGTTTGTTTGGAGTTCAAGCGCATCACCAGTTTCTGAGGGGAATTTGAGGCATGCGGTTAATAGAGCTGCCTCCACCGACTTTGGGACAGTTGATCCTTCTAAGGCTGTTCCACATGAAACTGTTGCTTCCAAAGCTGTTCAAGAACTGATTGAGAACATGAGTCCTGGTCGTAGAGGGAGTGGAGAGAAGGAGCTTGAAATGGATGAGGGAGCGAAATTTCCCACAAGTGGATCTCCATACACCTGCCAGAAGAAGGTGGACTTAGAAGGCAATGCAAACAAAAACCAACGGATGCCACCTGCAAGTGTTATGACAAGACTCATCCTCATCATGGTTTGGAGAAAACTCATAAGAAATCCTAATACCTACTCCAGTCTGTTGGGACTCGCATGGTCTCTCATATCATTCAGGTGGCACATTGAAATGCCAACTATTGTAAAAGGTTCCATCTCAATACTGTCTGATGCTGGTCTCGGAATGGCCATGTTCAGTCTAGGTCTGTTCATGGCATTACAACCCAAGATCATTGCCTGTGGAAAATCTGTTGCAGCATTTTCTATGGCTGTAAGGTTCTTGACAGGTCCAGCAGTTATTGCTGCAACCTCCATAGGCATTGGACTCCGTGGAGTTCTTTTGCATGTTGCAATTGTCCAGGCTGCCCTTCCCCAGGGTATCGTTCCCTTTGTGTTTGCCAAAGAATACAATCTCCATGCAGATATTCTTAGTACTGCGGTTATATTTGGAATGCTGATTGCATTGCCCATAACCATACTCTACTACGTGCTGCTTGGACTCTAA 1896 0.4541 MITIKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFIAADCLQKVVILGALFLWNTFTKHGSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKLLITEQFPETAGSITSFRVDSDVVSLNGREPLQTDAEIGEDGKLHVVVKRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAPSPKHGYTNSFQSNSGIGDVYSLQSSKGATPRTSNFEEEMLKMHKKRGGRSMSGELFNGGLVSSYPPPNPMFSGSTSAGGLKKKDSSGGSAAPNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGTVDPSKAVPHETVASKAVQELIENMSPGRRGSGEKELEMDEGAKFPTSGSPYTCQKKVDLEGNANKNQRMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLISFRWHIEMPTIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLIALPITILYYVLLGL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05319 631 Pfam Membrane transport protein 10 626 IPR004776 GO:0016020|GO:0055085
Viun3g05319 631 MobiDBLite consensus disorder prediction 335 360 - -
Viun3g05319 631 MobiDBLite consensus disorder prediction 335 350 - -
Viun3g05319 631 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 631 - -
Viun3g05319 631 NCBIfam auxin efflux carrier 1 631 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05319 Viun-Chr3 59592945 59595660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05319 102 631 Organic Solute Cotransporters AT5G57090 75.000 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05319 K13947 - gmx:100305383 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05319 3 59592945 59595660 Viun3g05319 3 59592945 59595660 ECH
Viun3g05319 3 59592945 59595660 Viun9g00384 9 2699930 2703394 PCT