Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00369 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCGGAGGCTGCTTCAGTGTTGAAGCACTCTCTTGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTGGCTGCAACTTTGCTGAGCCTAAGAGCCAGTTCCTTGAGAAGGGCTTGTCTCAAATCTCAGCCACACCAAACATCACACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATGTCGCCCTCAACAGGCTCCCAACAACACCTGGTCCTTTGCTCCATACACAGCCTTCTCTCTCCAATGCTCTCATCGCTGCACTCAAGAGAGCTCAGGCTCACCAGAGAAGAGGCTGCATTGAGCAGCAGCAGCAGCAGCCACTTCTCACCATCAAGGTCGAGCTTGAACAGCTCATCATATCTATCCTTGATGACCCTAGCGTTAGCAGGGTCATGAGAGAGGCTGGTTTCTCCAGCACTGCTGTTAAGACCAACATAGAGGACACCTCTTCAACACCTTCTGTTTTCCAGTGTTACAACACTTCTGGTGGTGTTTTCTCTTCTCCTTGTTCTCCTGCTCCCAGTGAGAACAACACACCAAGTGCCTTCAGGCAGAACCATTTCCTGGCTGCTTACACTTCTTCTGAGTTCACTTCTCCTTTTCTGTTCTCTCCACAGAAGAAGGCCTCGGTGTTTCCCATCACCGAGTCACCACCACCACCTTCTTCCAAGGAGGATATCAAGGTGGTTCTTGATGTCCTCCTGAGAAAGAAGAAGAGGAACACTGTGATAGTTGGTGACTCGGTGGCACTCACCGAAGGCCTTGTGGGGGAGCTGATGGGAAAGCTGGAAAGAGGAGATGTCCCTGATGAGTTGAAGTCAACACATTTCATCAAGTTTCAGCTTGCACCGGTTTCTCTGAGGTTCATGAAAAGGGAAGAAGTGGAGATGAGTCTCTCGGCACTGAAGAGGAAGGTGGATTCTGTTGCATCAGGTGGAGGAGCCATTTTCTATGTTGGAGACCTCAAGTGGACTGTGGAAGCAGCAACTTCCGGTGAAAAGGATGAAGGAGAAGTGTGTGGCTATAACCCTGTTGATCATCTACTTGCTGAAATAGGGAAGTTGTTTTGTGATTCCAGCACCAAGGTGTGGCTTGTGGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGGCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGTCTCCATGCTTCCAGTGTTCACGATTCAAAGATGACAATCTCCCAGAATCCATCTCATATGCTGGAAACAAAGCTCTTCGGTAACAGCAAGGAGGAGCAGGATAAACTCAACTGCTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAGTTGTTCAAACCTGGCCAGAAGAAACTGTTGCCTTCATGGCTTCAGTCTCATACCACTGAAGTCCATCAAAAGGATGAGTTGCTTCAGTTGAAAAGAAAATGGAACAGACTATGCCACTGTCTGCACCAGAGCAAACAATCTGATAACCATTGGAGCAACACTTTACACGGCAATCAGAGTTCAAATGCGAAGATCTACCCTTACAATTCATCATATCCCTGGTGGCCAAACCAGGGCAGTGTCTTCGCAGATTCAAGTTCAATATCTTTTGCTGATTCACCAGCCAAACCGGCTTATAGCTCCAACATTGTCCCTCGGTTTAGGCGCCAACAATCATGCACCATCGAGTTCAATTTCAGTGATGTGACTCAGAGAAAGCCATCCACAGCCTTGGATTCTCTCAAGAGCATGGAAGGTAATAGTAACGAAGTAAAGACTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTTCGGGGCAAACGGTGGAAAATATCATAACTACTGATAGAACACTGCGACGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATCTGAGACAGTTCCTTCCATAGCCGAGGCATTGGTTGATTCCAAATCTGCAAAGCAAAGTGCTACCACTTGGTTGTTGTTGCAAGGAACTGACTCTGTTGGGAAAACAAGGTTGGCACGTGCCATTGCAGAATCGGTGTTCGGCTCAGTCGATGCGCTCCTCCACTTGGACATGCTGAAAAATTCAGCAACCCCATTTGCTGAAAGGGTGGCTGAAGCATTGAAAAGCCAGGAGAAGCTTGTGATTCTGATAGAAAGTTTGGATTTTGCGGATGCCCAGTTCAGGAAGTTTCTTGCAGACGGGTTTGAAACTGGAAACTTTGGAAGTTTGAGTAGGAGTGAGGAGAGTTCAGGGCGTGCAATATTCATATTGACCAATGGTGACAACAGGGGCAATGAAGAGCATAGCAATAAGGAGTCAGTGATGAAGTTGGTGCTGCAGATAAGTGAAACAAAGCCTGGTTTGGAGTGTTCATCACCTTGTTTGGGTGAGAAGAGAAGGGGTGAAGTGCTGGATTTGTTTTCCAAGGTTAAGAACAGGAAAGTGTTTTGTCGGCATTCAAGCTTCAACAATCTTGACCTGAACATGAAAGCTGATGATGAAGAGGATGAGAAAACTGGTGGAAGCAGTCCAATTTCAAGTGATTTGACAAGGGAAACTGTGAGCTGGAATGGGGTTCTTGAGTCAATTGAGAACAGGTTTGAGTTGAATGAAAGTGCAGAGAGGGAGAGGGAGGTGGGAGAGATGTTAGTGTCAAAGATGAAAGAGTGGTTTGAAGAGGTTTATGGAAAGAAAGAAAGTGTGGTGAAATTTACTGTAGAGGAGAGGGTGATAGAAGAAATTGGTGTGGGGTGTGGAAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTAGAGACAGTTAACTTTGGTGGGGTGGAAGGGGGTATAGGTTTTACACTTTGTTGGGGTGATAATGGTAATGGTAATGGTAATGGTAAAGGTGATAGCAAATGGGATAGTGGATTCATGGGTTCATGTTTGCCCAAGAATCTCAAAGTTAACTACTTCATGGATTAA 3060 0.4647 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPHQTSHPLQCRALELCFNVALNRLPTTPGPLLHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKTNIEDTSSTPSVFQCYNTSGGVFSSPCSPAPSENNTPSAFRQNHFLAAYTSSEFTSPFLFSPQKKASVFPITESPPPPSSKEDIKVVLDVLLRKKKRNTVIVGDSVALTEGLVGELMGKLERGDVPDELKSTHFIKFQLAPVSLRFMKREEVEMSLSALKRKVDSVASGGGAIFYVGDLKWTVEAATSGEKDEGEVCGYNPVDHLLAEIGKLFCDSSTKVWLVATASYQTYMRCQMRQPPLETQWALQAVPVPSGGLGLSLHASSVHDSKMTISQNPSHMLETKLFGNSKEEQDKLNCCEECASNYEKEAQLFKPGQKKLLPSWLQSHTTEVHQKDELLQLKRKWNRLCHCLHQSKQSDNHWSNTLHGNQSSNAKIYPYNSSYPWWPNQGSVFADSSSISFADSPAKPAYSSNIVPRFRRQQSCTIEFNFSDVTQRKPSTALDSLKSMEGNSNEVKTTLALGNSTFGGSGQTVENIITTDRTLRRAHICKLLQENVPWQSETVPSIAEALVDSKSAKQSATTWLLLQGTDSVGKTRLARAIAESVFGSVDALLHLDMLKNSATPFAERVAEALKSQEKLVILIESLDFADAQFRKFLADGFETGNFGSLSRSEESSGRAIFILTNGDNRGNEEHSNKESVMKLVLQISETKPGLECSSPCLGEKRRGEVLDLFSKVKNRKVFCRHSSFNNLDLNMKADDEEDEKTGGSSPISSDLTRETVSWNGVLESIENRFELNESAEREREVGEMLVSKMKEWFEEVYGKKESVVKFTVEERVIEEIGVGCGNFTNSMFEKWLKDIFQSSLETVNFGGVEGGIGFTLCWGDNGNGNGNGKGDSKWDSGFMGSCLPKNLKVNYFMD 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00369 1019 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Viun9g00369 1019 ProSiteProfiles Clp repeat (R) domain profile. 8 170 IPR004176 -
Viun9g00369 1019 Gene3D - 630 826 IPR027417 -
Viun9g00369 1019 Gene3D - 233 415 IPR027417 -
Viun9g00369 1019 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 972 - -
Viun9g00369 1019 FunFam protein SUPPRESSOR OF MAX2 1 9 170 - -
Viun9g00369 1019 Gene3D - 9 170 IPR036628 -
Viun9g00369 1019 Pfam Clp amino terminal domain, pathogenicity island component 131 166 IPR004176 -
Viun9g00369 1019 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Viun9g00369 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 652 785 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00369 Viun-Chr9 2570465 2574681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00369 - - gmx:102660146 1609.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00369 9 2570465 2574681 Viun9g00369 9 2570465 2574681 ECH
Viun3g05304 3 59445431 59449621 Viun9g00369 9 2570465 2574681 PCT