Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00341 ATGAAAGAGGAAAACGAGAGGAAAATTGTGCTGACGAAGCCATTAACAATAGACAGTGAATCTGATTCAGACGCGTATAAAGCCCCTAATCTTATGCAACGAATACTAAGTTTATTCAAGAATGTACGCCCCGGTTCTGACCTCACACGCTTTCAGCTGCCACCACTATTCAACTTACCAAAGTCACAACTTCAGTGCTATGGTGAATCAGTGTATTGCACAGGATCAGACTTGCTAAGCATGTGCAACAATGGAGAGAGTCCAATTGACAGGTTCATATCTGTTGTAGCATGGAGCATATCTACCACTCGCCCTGTGAATTTTGGGGTTGCTCCTTATAATCCAATTCTTGGCGAGACACACCATGTTTCAAAGGGAAATCTTAATGTGTTATTGGAGCAGATTTCACATCACCCTCCAGTAGCTGCTCTCCATGCAACTGATGAGAAGGAAAACATTGAAATGATATGGTGCCAGCGGCCTGATCCAAAGTTTAATGGCAGATCAATTGAAGCTAAAGTGCATGGTATACGGCAGCTGAAGCTACTCAATCATGGTGAAACATATGAAATGAATTGCCCTCACCTTTTACTTAAAATTTTTCCAGTTGCTTCGGCTGATTGGTCTGGCACAGTTACCATCCGGTGCCAAGAGACAGGCCTAGTGGCTGAGTTATCCTACAGATCAAGTAGTTCCTTTCTAGGAATTGGAGGGAACCATAGAATGATCAAAGGAAAAATCCTTGACTCTTCATCACTAAAAGTTTTGTATGAAGTTGATGGTCATTGGGATAGGATTGTAAAATTGAAGGATACAAATAATAAGGAAGTAAGAGTAATATATGATGCACAGGAAGTTCTGTCAGGTCTAGAAACACCAAAACTCAAGGATTCGGAGAGTGTATGGCCAACTGAATCAGCTCATGTTTGGGGAGAACTGAGTGAAGCCATAGTGAAGAAGGACTGGGAGAAAGCAAGAGAAGCAAAGCTAGAAATTGAGGAAAGACAAAGGAAGCTCTTGAGAGAAAGAGACTCAAAAGGAGAAACATGGGTTTCTAAACATTTTGTAGTATCTAACAACAAAGAAGGGTGGGAGTGTTCACCTATTCATAAGACTGTACCAGCTGCCCCCATCACAGCACAATAA 1146 0.4171 MKEENERKIVLTKPLTIDSESDSDAYKAPNLMQRILSLFKNVRPGSDLTRFQLPPLFNLPKSQLQCYGESVYCTGSDLLSMCNNGESPIDRFISVVAWSISTTRPVNFGVAPYNPILGETHHVSKGNLNVLLEQISHHPPVAALHATDEKENIEMIWCQRPDPKFNGRSIEAKVHGIRQLKLLNHGETYEMNCPHLLLKIFPVASADWSGTVTIRCQETGLVAELSYRSSSSFLGIGGNHRMIKGKILDSSSLKVLYEVDGHWDRIVKLKDTNNKEVRVIYDAQEVLSGLETPKLKDSESVWPTESAHVWGELSEAIVKKDWEKAREAKLEIEERQRKLLRERDSKGETWVSKHFVVSNNKEGWECSPIHKTVPAAPITAQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00341 381 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 34 365 IPR000648 GO:0008289
Viun9g00341 381 ProSitePatterns Oxysterol-binding protein family signature. 133 143 IPR018494 -
Viun9g00341 381 SUPERFAMILY Oxysterol-binding protein-like 33 367 IPR037239 -
Viun9g00341 381 Gene3D - 117 291 - -
Viun9g00341 381 Pfam Oxysterol-binding protein 38 365 IPR000648 GO:0008289
Viun9g00341 381 FunFam Oxysterol-binding protein-related protein 4B 302 373 - -
Viun9g00341 381 FunFam Oxysterol-binding protein-related protein 4C 116 294 - -
Viun9g00341 381 Gene3D - 302 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00341 Viun-Chr9 2326934 2331227 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00341 K22285 - gmx:100813724 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00341 9 2326934 2331227 Viun9g00341 9 2326934 2331227 ECH
Viun3g05282 3 59295547 59297720 Viun9g00341 9 2326934 2331227 PCT