Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05282 ATGCCCAAGTCAGAACTTCAGTGCTATGCAGAGTGCGTATATTCCACAGCATTAGACATCCTAAGCAACCTCAACGGTGGCAACACACCACTGAATAGACTCATAAATGTTGTAGCATGGACCATTTCCACAGTGCGCCCCTTTTGGGTTGGTGTTGCTCCCTACAATCCCACTCTTGGTGAGACTCACCATGTTTCCAAAGGAACCCTCAATGTCTTACTCGAACAGGTTTCACATCACCCTCCCGTCTCTGCACTCCATGCAACCGATTCTAAGGAGAACATAGAAATTATATGGTGCAACTCTACTTCTCCAAAATTCACTGGTACTTCAGTAGAAGTTCGTGTGCATGGCATACGACAGTTGAAGCTCCACAATCATGGAGAGACGTATGAAATGAATTCTCCTGATCTCCTTCTCAGAATTTTCCCTGTCCCTGGAGTTGATTGGGTTGGCAATGTCACTATCCGGTGCATAGAAACAGGCCTTGTCGCAGAATTAAGCTACCATAGCCAATCTTTCTTTGGGTTTGGGACAAACCGGAGACTGGTTAAAGGGAAGATCTTTGATTCTTTATCTAAGAAAATTCTGTATAAAATTGAAGGTCATTGGGACAGTACTGTAACAGTGAAGAATACAGAGAATGCAGAAGTAAGAGTGATCTATGATGCAAAACAAGTTATATCAGGACTCCAACCTCCTATTGTGAAGGATCCAGAGAGTGTGTGGGCAACAGAAACAGCTCATGTTTGGAGTGAGTTGAGCGAAGCCATCTTAAACAAAGAGTGGGAAAAAGCAGAAGAAGCAAAGAAAAGTATAGAAGAAAGACAAAGGGAGCTTCGCAGAGAAAGAGAATCAAAAGGAGAAAATTGGGTTCCTAAACACTTTACTGTGTCTTACAGCAAAGAAAAGGGTTGGAACTGTTCACCGATTGAAAAGTGGGTCCCAAATGCCCCTATCATCTCCTTGTAA 972 0.4311 MPKSELQCYAECVYSTALDILSNLNGGNTPLNRLINVVAWTISTVRPFWVGVAPYNPTLGETHHVSKGTLNVLLEQVSHHPPVSALHATDSKENIEIIWCNSTSPKFTGTSVEVRVHGIRQLKLHNHGETYEMNSPDLLLRIFPVPGVDWVGNVTIRCIETGLVAELSYHSQSFFGFGTNRRLVKGKIFDSLSKKILYKIEGHWDSTVTVKNTENAEVRVIYDAKQVISGLQPPIVKDPESVWATETAHVWSELSEAILNKEWEKAEEAKKSIEERQRELRRERESKGENWVPKHFTVSYSKEKGWNCSPIEKWVPNAPIISL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05282 323 SUPERFAMILY Oxysterol-binding protein-like 2 308 IPR037239 -
Viun3g05282 323 FunFam Oxysterol-binding protein-related protein 4B 243 315 - -
Viun3g05282 323 FunFam Oxysterol-binding protein-related protein 4C 58 235 - -
Viun3g05282 323 Pfam Oxysterol-binding protein 2 308 IPR000648 GO:0008289
Viun3g05282 323 Gene3D - 244 315 - -
Viun3g05282 323 Coils Coil 256 290 - -
Viun3g05282 323 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 302 IPR000648 GO:0008289
Viun3g05282 323 ProSitePatterns Oxysterol-binding protein family signature. 75 85 IPR018494 -
Viun3g05282 323 Gene3D - 56 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05282 Viun-Chr3 59295547 59297720 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05282 K22285 - gmx:100819769 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05282 3 59295547 59297720 Viun9g00341 9 2326934 2331227 PCT