Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00327 ATGGGATGTTCACATTCAAGGTTAGATGATGAAGAAGCAGTTCAGCTTTGTAGAGACAGAAAGAAGTTCATCAAACAAGCTGTTGAGCAAAGGACCCGGTTGGCCACAGGACACATAGCATACATAGAATCTCTGAAAAGAGTTTCAGCAGCACTTCGTGATTACATTGAAGGTGATGAACCTCGTGAGTTCTCATTGGACAATGCCATCACCCCACCTTTCACACCGGTGAAGAAGAAAAGTGGCCCAGGATTCATTCCCATATCAGCAAAACCCTTTGCAACAACAGGAGCTATTGAGTTTGGGATCGGACCAAACTCTACTTTGAAAGTGAATTACCTTAGGCCTGGTGGTAACCCAGCAATTTCAGTTGAGGAAAGGCCTCAATCCCCGGAAAGGGTACGTGTTGAGACATATTATCCTCCAATGCAGCAGCAGTATGGTTTTGATGGATTTTTCAACATGCAATCCTCACCAGTGAATCCCTCAATTTTTGCCTATTCTCCCAATAATAGGCCTAATATCCCTCCCCCTTCACCTCAAGCTTCCCAATGGGATTTTTTTTGGAACCCCTTTTCGTCTTTGGACAGCTATGGCTATCCTGCAAAAAGTGTTGATCACACTGCAACGGATGATGAATACAGAGGACTCAGGCAGGTTAGAGAAGAAGAAGGAATACCAGACCTGGAAGAAGATGAAACTGAACATGAAGATGGTGTTGGAAAAAGAAATGTAGCAGAAGAAAGAACTAGACCCAACATGAATTCTTCAAAAGAAGAAGTTATTGTTGAAGATGTTGAAGATGATGACGACGATGATGATGATGATGATGAGGAAGAGGAGGAGGAAGAGGGTGAGGAGGAAGAGGAGGAAGAAACAGACGTTGAAGATGAGACTGAGCATGTTGCCAAAGATTCCCAAGCTCATGGAAGTGCAAGTTTTGAAGTATCAAAAGCTCAAGCAGCTGGTCATATTGAATCTAGCCATAGAGAAATGACAATTGGTAAGAAGGATGCTGTGGAAGAAACACCGGGTTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCAGAAGTGATCAATGACATTGAAACTCAATTCACAATCGTATACAATGCAGCTAATGATGTTGCAGCATTGTTAGAGGCCAAGAAATCTCAATATTTGTTGACTTCTAATGAACTTTCAGGATCAAAGTTGTTGAACCCGGTAGCTCTGATTCGATCAGCTTCTTCACGCTCTTCTTCATCACGATATTTGGTAAATTGTTCAAGCACTGGCAAGGAAGGTTGTGATGGCACAAAGGATCTCTCTGAGGAACATTGTATGTTATCTGGTAGTCACCACTCCACATTGGACAGATTAAATACCTGGGAGAAGAAACTCTATGAAGAAGTCAGGTCTGGGGAGCGTATCCGAATTGCATATGAGAAGAAATGCAAGCAACTCAGGAACTTCGATGCAAAAGGAGAGGACCCCTCTTGCGCAGATAAAGCAAGAGCAGCCATTAGAGATCTTGATACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCAAGGCGAATCGAAACTCTAAGGGATGAAGAGCTATATCCCCAACTTCTTGAATTGGTGCAAGGGTTGGAAAGGATGTGGAAAGTGATGGCAGAATGCCATCAGAAACAGAAGAGAACCTTGGATGAGGCTAAGATTCTTCTAGCTGGAACTTACTCTAAACTACATGCTAGAAAACAGTCTTCCATGTTAATGACAGATCCGAACAGGCTAGCTCGTTCAGCCTCCAATCTTGAATTTGAGTTAAGGAACTGGAGAAACGCCTTTGAGTCATGGATCACTTCTCAAAGATCCTACATTCATGCACTAACCGGATGGCTTCTTCGGTGCATGAGATCTGAGCCTGATGCATCCAAGTTACCATGCTCTCCTCGCAGATCCAGTGGCACTCACCCTTTGTTTGGACTCTGTGTTCAGTGGTCAAGGCGCCTAGATGCCATACAAGAAAAGGCAGTGCTTGATGGCTTGGACTTTTTTGCAGCTGGAATGGGGTCCCTCTATGCACATCAGTTGAGAGAAGATTCTAGGAGAAACTCATTTGGACCAAAACAAAGTAATGGTAACATGGAACTAGTGGAAGCTGGTGAGGTGGAAGAGGTAATGGCTCCAGAAAAACTTGCTGAAGTTGCTATCAAGGTGCTTTGTGCTGGAATGTCTGTTGCTATTAGCTCACTGGCAGAGTTTGCTTTGGATTCTGCAGAGGGTTACAATGAAGTTGTTAAGCAATGGGACACTGTCAAGTGTCAAAATCAAAACACTGCTTCTAACAACACCAGGACTTCTAACAACACCAGGACTTAG 2364 0.434 MGCSHSRLDDEEAVQLCRDRKKFIKQAVEQRTRLATGHIAYIESLKRVSAALRDYIEGDEPREFSLDNAITPPFTPVKKKSGPGFIPISAKPFATTGAIEFGIGPNSTLKVNYLRPGGNPAISVEERPQSPERVRVETYYPPMQQQYGFDGFFNMQSSPVNPSIFAYSPNNRPNIPPPSPQASQWDFFWNPFSSLDSYGYPAKSVDHTATDDEYRGLRQVREEEGIPDLEEDETEHEDGVGKRNVAEERTRPNMNSSKEEVIVEDVEDDDDDDDDDDEEEEEEEGEEEEEEETDVEDETEHVAKDSQAHGSASFEVSKAQAAGHIESSHREMTIGKKDAVEETPGFTVYVNRRPTSMAEVINDIETQFTIVYNAANDVAALLEAKKSQYLLTSNELSGSKLLNPVALIRSASSRSSSSRYLVNCSSTGKEGCDGTKDLSEEHCMLSGSHHSTLDRLNTWEKKLYEEVRSGERIRIAYEKKCKQLRNFDAKGEDPSCADKARAAIRDLDTQITVSIHSVEAISRRIETLRDEELYPQLLELVQGLERMWKVMAECHQKQKRTLDEAKILLAGTYSKLHARKQSSMLMTDPNRLARSASNLEFELRNWRNAFESWITSQRSYIHALTGWLLRCMRSEPDASKLPCSPRRSSGTHPLFGLCVQWSRRLDAIQEKAVLDGLDFFAAGMGSLYAHQLREDSRRNSFGPKQSNGNMELVEAGEVEEVMAPEKLAEVAIKVLCAGMSVAISSLAEFALDSAEGYNEVVKQWDTVKCQNQNTASNNTRTSNNTRT 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00327 787 Coils Coil 278 298 - -
Viun9g00327 787 MobiDBLite consensus disorder prediction 204 332 - -
Viun9g00327 787 MobiDBLite consensus disorder prediction 206 225 - -
Viun9g00327 787 Pfam Protein of unknown function (DUF632) 357 684 IPR006867 -
Viun9g00327 787 MobiDBLite consensus disorder prediction 262 298 - -
Viun9g00327 787 MobiDBLite consensus disorder prediction 236 261 - -
Viun9g00327 787 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Viun9g00327 787 PANTHER UNCHARACTERIZED 1 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00327 Viun-Chr9 2202078 2207127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00327 1 720 Acyl Lipid Metabolism Gene Families AT2G27090 28.121 2.51e-65 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00327 - - gmx:100780704 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00327 9 2202078 2207127 Viun9g00327 9 2202078 2207127 ECH
Viun3g05271 3 59194045 59198849 Viun9g00327 9 2202078 2207127 PCT