Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05271 ATGGGATGTTCTCAATCAAGGTTGGATGATGAAGAGGCAGTGAAGCTTTGCAAAGACAGAAAACATTTCATCAAACAGGCTGTTGAGCAAAGAGCTCAATTTGCTACTGAGCATGTAGCATACATTCAGTGTCTGAAAAGGGTTTCAGCAGCACTGTTAGATTACTTCGAAAGCGATGAGTCGCACCATTTGCCATTAGATTCATTCATAAGCCCACCTTCCACACCTGTGAAGAAAACCAGTCCTCTTGGCTTCATTCCCATATCATCAAAATCCTTCAGCCCAACAAAAAATGAGTTTGATCCCAAAACAACTTTGAAGGTGAATTACTTAAGGCCGGGTGGTACTCCAGCAATTTCAGTTGAGGAAAGGCCTCAAATGCCGGAAGTGGTTCGGGTCGAAACATATTATCCCATGCACCAGTTTGGCAATGATGGTTTCTTTCCTATGCAATCCTCACCTATGAATTCCTCAATTTTTGCTTATTCTCCCAATAATAGGCCTAATATCCCTCCTGCTTCACCTCAATCTTCCCTATGGGAATCATTTTGGAACCCTTTTTCATCATTGGACTATTATGGTTACCCCAACCAAAGTAGTTTTGACCAGACTGGGATGAGGCAGGTCCGAGAAGAAGAAGGAATACCAGACCTGGAAGAAGATGGAACTGAACAAGAGGATTTTGTTGAAAAGGGAAATGTAGCAGAAGTAAGTGCCAAAATTGATGTGAACTCGTCCAAAGAAGAAGTCACGGTTGAAGATGTTGATGAACCCAAGGAGGAAGTGGAGGGAAAGGTTGCTGAAACTGGAACTGTGAATGAAGTCACAGAACAAGCCAATGGCGGTGAATGTTTTCAAGTATCTAAAGCTCAAACTGCTGGTCAGGAAATGGCAACTGGTAATCAAGAAGCAAAGGAAGACACACCTGGTTTTACTGTTTATGTTAACCGAAGACCAACAAGCATGGCTGAAGTGATCAGGGATCTTGAAGCTCAATTCACAGTAATCTGCGATGCGGCTAATGATGTCTCCGCATTGTTAGAGGCCAAGAAAGCTCAGAATTTATCAGCATCAAATGAACTGTCAGCATCAAAATTGTTGAACCCAATAGCGCTGTTCCGCTCAGCTTCCTTACGATCATCCTCATCAAGAATTTTAGTGAATTCTTCAGACACTACGGATGAGGATTTCGAAGGCACCGATGATTCATCCGAGGAAGATTGTTTGTTTTCTGTTAGTCATCAATCAACGTTAGACAGGTTATATGCATGGGAGAAGAAACTCTACGAGGAAGTCAGATCTGGAGAACGTGTTCGAATCGCGTATGACAAGAAATGTCAGCAACTCAGGAATCATGATGTAAATGGAGAGGAACCCTCTTCCCTTGATAAAACAAGAGCAGCCATTAGAGATCTACATACCCAGATAACAGTTTCAATACACTCAGTTGAATCTATTTCCAGGAGAATTGAAACTCTAAGGGATGAGGAGTTGCATCCCCAGCTTTTTGAACTGGTGCAAGGGCTTGCCAAGATGTGGAAAGTGATGGCAGAATGTCATCAGGCACAGCAGAGAACCTTAGATGAAGCCAAGATTCTTCTTGTTGACACTGATGCGAGAAAACAGTGTGCCACATCACTAACTGATCCACAAAGGCTTGCTCGTTCGGTCTCCAGTCTTGAAACTGAACTGAGACATTGGCGAAACACCTTTGCATCGTGGATTAGTTCTCAAAGATCCTATATCCATGGTCTAACTGGTTGGCTTCTAAGGTGTGTGAGATGTGAGCATGATCCGTCAAAGCTAGCATGCTCTCCTCGTAGGTCTAGTGGCACACATCCATTATTTGGACTTTGTGTTCAGTGGTCAAGGCGTCTAGATGTCCTTCAAGAAACTGCAGTACTTGATGGCATAGACTCTTTTGCAGCAGGCGTAGGGTCCTTCTATGTACAACAGTCAAGAGAAGAAACTCGAAGAAATCAAGTTGGATCAAAAGAACATGATGAGAATATGAAAATGGTGGAAGTTGGTCATGTTGAAGAAGTGATGAGCACTGAGAAATTGGCTGAAGTTGCTATGGAGGTGCTCTGTGCTGGTATGTCAACTGCTATGAGCTCAATGGCAGAGTTTGCTGTTGATTATGCTGAGGGATACAATGAAATTGTTAAGAAATGGGAGAATGTGAACTTGCAGCAGATTTCTTGTGGAACTGATACATAG 2220 0.4288 MGCSQSRLDDEEAVKLCKDRKHFIKQAVEQRAQFATEHVAYIQCLKRVSAALLDYFESDESHHLPLDSFISPPSTPVKKTSPLGFIPISSKSFSPTKNEFDPKTTLKVNYLRPGGTPAISVEERPQMPEVVRVETYYPMHQFGNDGFFPMQSSPMNSSIFAYSPNNRPNIPPASPQSSLWESFWNPFSSLDYYGYPNQSSFDQTGMRQVREEEGIPDLEEDGTEQEDFVEKGNVAEVSAKIDVNSSKEEVTVEDVDEPKEEVEGKVAETGTVNEVTEQANGGECFQVSKAQTAGQEMATGNQEAKEDTPGFTVYVNRRPTSMAEVIRDLEAQFTVICDAANDVSALLEAKKAQNLSASNELSASKLLNPIALFRSASLRSSSSRILVNSSDTTDEDFEGTDDSSEEDCLFSVSHQSTLDRLYAWEKKLYEEVRSGERVRIAYDKKCQQLRNHDVNGEEPSSLDKTRAAIRDLHTQITVSIHSVESISRRIETLRDEELHPQLFELVQGLAKMWKVMAECHQAQQRTLDEAKILLVDTDARKQCATSLTDPQRLARSVSSLETELRHWRNTFASWISSQRSYIHGLTGWLLRCVRCEHDPSKLACSPRRSSGTHPLFGLCVQWSRRLDVLQETAVLDGIDSFAAGVGSFYVQQSREETRRNQVGSKEHDENMKMVEVGHVEEVMSTEKLAEVAMEVLCAGMSTAMSSMAEFAVDYAEGYNEIVKKWENVNLQQISCGTDT 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05271 739 Pfam Protein of unknown function (DUF632) 322 645 IPR006867 -
Viun3g05271 739 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Viun3g05271 739 PANTHER UNCHARACTERIZED 1 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05271 Viun-Chr3 59194045 59198849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05271 405 733 Acyl Lipid Metabolism Gene Families AT2G27090 35.119 1.75e-55 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05271 - - gmx:100818631 1187.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05271 3 59194045 59198849 Viun3g05271 3 59194045 59198849 ECH
Viun3g05271 3 59194045 59198849 Viun9g00327 9 2202078 2207127 PCT