Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00192 ATGGACTTTACTACGCAAGGATTTGTCTACTCCTTCAAAATATACCGGCATGCTTCAAGCAACCAAAGATATTTTCAGAGAAGAAGGGATGCGGGGTTTTTGGCGGGGAAATGTGCCAGCTTTGCTCATGGTTATGCCATATACAAGTATACAATTTACTGTTCTACACAAGTTGAAGACTCTTGCCTCTGGTTCTTCCAAAACAGGTCTATTATGTTCATTGCTTTGCTTTCTGTTGCTGCAGAGAATCACATGAATTTGAGTCCTTATCTGTCCTATATGAGTGGGGCAATAGCTGGGAGTGCTGCTACTGTAGGTTCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCCCAGGGTGAACCAAAGGTTTATCCAAACATGAGAACAGCATTTGTTGATATTGTCCAGACTCGTGGCTTCCAAGGCTTGTATGCTGGATTGTCCCCAACCCTAGTTGAGATTATACCATATGCAGCCCTACAATTTGGCACCTATGATACATTTAAACGTTGGGCCATGGCGTGGAATCAACGTCAACATTCGAATTCTACTACAGAAAACATCTCTAGTTTTCAGCTTTTCCTCTGTGGAGTGAGTGCAGGAACATGTGCCAAGCTCGCCACTCATCCACTTGATGTAGTCAAGAAAAGATTTCAGATTGAAGGTCTACAAAGGCATCCAAGATATGGAGCTCGGGTTGAACACCGTGCATACAACAATATGCTTGATGCCATAAAGCGAATATTACAAATGGAGGGTTGGGCTGGTCTATATAAGGGGATAGTTCCATCAACTGTTAAAGCTGCACCAGCTAATGCTGTAACATTTGTGGCGTATGAATTGATATCAGATTGGCTGGAATCTCTTTTGACTTGA 882 0.4252 MDFTTQGFVYSFKIYRHASSNQRYFQRRRDAGFLAGKCASFAHGYAIYKYTIYCSTQVEDSCLWFFQNRSIMFIALLSVAAENHMNLSPYLSYMSGAIAGSAATVGSYPFDLLRTILASQGEPKVYPNMRTAFVDIVQTRGFQGLYAGLSPTLVEIIPYAALQFGTYDTFKRWAMAWNQRQHSNSTTENISSFQLFLCGVSAGTCAKLATHPLDVVKKRFQIEGLQRHPRYGARVEHRAYNNMLDAIKRILQMEGWAGLYKGIVPSTVKAAPANAVTFVAYELISDWLESLLT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00192 293 Gene3D Mitochondrial carrier domain 61 291 IPR023395 -
Viun9g00192 293 ProSiteProfiles Solute carrier (Solcar) repeat profile. 87 173 IPR018108 -
Viun9g00192 293 ProSiteProfiles Solute carrier (Solcar) repeat profile. 190 287 IPR018108 -
Viun9g00192 293 PRINTS Mitochondrial carrier protein signature 102 120 IPR002067 GO:0055085
Viun9g00192 293 PRINTS Mitochondrial carrier protein signature 146 164 IPR002067 GO:0055085
Viun9g00192 293 PRINTS Mitochondrial carrier protein signature 199 221 IPR002067 GO:0055085
Viun9g00192 293 PANTHER SOLUTE CARRIER FAMILY 25 80 288 - -
Viun9g00192 293 Pfam Mitochondrial carrier protein 190 288 IPR018108 -
Viun9g00192 293 Pfam Mitochondrial carrier protein 88 174 IPR018108 -
Viun9g00192 293 SUPERFAMILY Mitochondrial carrier 80 283 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00192 Viun-Chr9 1153164 1157347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00192 78 293 Organic Solute Cotransporters AT3G21390 73.303 5.93e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00192 K15108 - gmx:100803750 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00192 9 1153164 1157347 Viun9g00192 9 1153164 1157347 ECH
Viun3g05753 3 62905526 62909810 Viun9g00192 9 1153164 1157347 PCT