Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00190 ATGGAATACAGAACCTTAGAACTCAACATCATATCAGCAAAAGACATAAAGAATGTTAATCTTTTCTCGAAGATGGACGTTTACGTCGTCATGTCGCTCACCGGTGACCCTTATCATCTTCAAACGGCAACCACCCACGTGGACAAAGACGGCGGTTGCAACCCCAAATGGAACTATCCGGTGAAATTCTCCGTCAACGAAGCGCTGGCAAAGGAGAACCGTTTGACCCTCGAGGCCAAACTCGTCTCCGATCGCACCCTCGGCGACACCATCATCGGCACCGTCCATGTTCCTCTCAGGGAGCTCGTCGACAACCCCGGCGAAGACGACGGCTTCCGAGACGTCAGCTACAAGGTCGTCAAATCTTCAGGAAAATCCAAGGGGTCATTCAATTTCTCTTACAAATTCGCCGAAAAGGTCTCTAATTCCTTCTCCGCCGGAAGGCTCTCCGCCGCCGCCGCCGCGTCAAAAACAGAAACGGAGCCAGTGATGGCTTACCCTCCTCAGACCTCCGCGGGAACAAGTGCAATTCCTTTCGGAACATCACATCCTCCGCCGCCGCCCAACCCGGCTCCACAATATGGATACCCACCCCAACAACCGTCTTACACCGGATACCCACCGGCTCAACCCGGATACGGGTATCCACCTCAACAGAGCTACGGTGGATACCCCCCACAACAAAACGGATACGGTGGATACCCACAGCAAAACGGTTATGGTTATGGATATCAAGGGTACCCCCAACAAGGTGGATATGGATATCCACCGGCCCAGAAACCAAAGAAGAACAATTTCGGAATGGGGTTGGGAGCTGGATTGCTCGGCGGTGCCTTGGGTGGTATGTTGATCGGAGATATGGTATCTGATGCTGCGGATTATGATGCTGGATACGATGCTGGATTTGATGATGCCGGTGGATTTGATTTTTAA 933 0.522 MEYRTLELNIISAKDIKNVNLFSKMDVYVVMSLTGDPYHLQTATTHVDKDGGCNPKWNYPVKFSVNEALAKENRLTLEAKLVSDRTLGDTIIGTVHVPLRELVDNPGEDDGFRDVSYKVVKSSGKSKGSFNFSYKFAEKVSNSFSAGRLSAAAAASKTETEPVMAYPPQTSAGTSAIPFGTSHPPPPPNPAPQYGYPPQQPSYTGYPPAQPGYGYPPQQSYGGYPPQQNGYGGYPQQNGYGYGYQGYPQQGGYGYPPAQKPKKNNFGMGLGAGLLGGALGGMLIGDMVSDAADYDAGYDAGFDDAGGFDF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00190 310 Pfam C2 domain 5 106 IPR000008 -
Viun9g00190 310 SMART C2_3c 5 111 IPR000008 -
Viun9g00190 310 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Viun9g00190 310 Gene3D C2 domain 4 137 IPR035892 -
Viun9g00190 310 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 137 IPR035892 -
Viun9g00190 310 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Viun9g00190 310 PANTHER INGRESSION PROTEIN FIC1 1 286 - -
Viun9g00190 310 MobiDBLite consensus disorder prediction 163 178 - -
Viun9g00190 310 MobiDBLite consensus disorder prediction 180 214 - -
Viun9g00190 310 MobiDBLite consensus disorder prediction 156 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00190 Viun-Chr9 1147883 1149228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00190 - - gmx:547451 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00190 9 1147883 1149228 Viun9g00190 9 1147883 1149228 ECH
Viun3g05751 3 62893217 62894392 Viun9g00190 9 1147883 1149228 PCT